BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06481 (UTR included)
(1231 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 361 2e-99
BF01049A2D11 178 1e-44
BF01011A1H06 117 4e-26
BF14_729_C1 103 7e-22
BF01017A2H11 92 2e-18
>BF14_729_C3
Length = 2041
Score = 361 bits (182), Expect = 2e-99
Identities = 229/246 (93%)
Strand = Plus / Plus
Query: 573 agagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaatcc 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1392 agagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaatcc 1451
Query: 633 catgtccgtaaccacaccgcaggacctcaagacaccgtaagcgcattctgccggcatcga 692
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 1452 catgtccgaaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggcatcca 1511
Query: 693 gagcggtacgccagaaaattaagaaatcgatggtggtaggtgataaataacaaggaccaa 752
||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 1512 gagcggtacgccannnnattaagaaatcgatggcggtagatgataaataacaaggaccaa 1571
Query: 753 ctgacagacagtcacatctcgtctgcccgtggttatggttgctgtgaagtaaccaaaacg 812
|||||||||| ||||| |||||||||||||| | | |||||||| |||||||| |||||
Sbjct: 1572 ctgacagacattcacacctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacg 1631
Query: 813 tcggga 818
||||||
Sbjct: 1632 tcggga 1637
Score = 297 bits (150), Expect = 2e-80
Identities = 198/214 (92%)
Strand = Plus / Plus
Query: 362 gggtgtataaaatctcgattgtgactgtggcttgtcatacattggacagacgaagaggag 421
||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 gggtgtatacaaactcgactgtgactgtggcttgtcatacattggacagacgaagaggag 1192
Query: 422 catcggtacaaggattaaagaacacatctcagatatcaaaaataggcgcgcgtcgaagtc 481
|||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct: 1193 catcggtacaagagttaaggaacacatctcagacatcaaaaacaggcgcgcgtcgaagtc 1252
Query: 482 agcagtgtgtgaacaaataatgcacaaagcaggccactacattcggtttgataaaccaca 541
||||||||||||||| | |||| ||||| |||||||||||||||| ||||||||||| ||
Sbjct: 1253 agcagtgtgtgaacacacaatggacaaaccaggccactacattcgttttgataaacctca 1312
Query: 542 gatcctcactcgggaagacaagtatataccgaga 575
|||||| ||||||||||||||||||||||||||
Sbjct: 1313 aatcctcgctcgggaagacaagtatataccgaga 1346
Score = 204 bits (103), Expect = 2e-52
Identities = 225/263 (85%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 1 ttgtttcagtgagcccaacaccttggctatgctggccatcaagaggctgtgctgcagtat 60
||||| ||| |||||||||||||| | |||||| ||| | |||||| | ||||||| ||
Sbjct: 840 ttgttacagagagcccaacacctttgtgatgctgaccacctagaggccgagctgcagcat 899
Query: 61 gtaaaacatgctctcatcaccaccaacctgcccatgcctcgccatcatcgcaagaatcac 120
|||||||||||||||| | || |||||||||| |||||||||| ||||||||||| |||
Sbjct: 900 gtaaaacatgctctcactatcaacaacctgcccgtgcctcgccagcatcgcaagaaccac 959
Query: 121 ttgaagcaacccagagtagagcgacaacctgcga-attgtcatatgtgaaggg-gtcact 178
|||||| ||||| ||| || ||||||||||||| | | ||||||||||||| || |||
Sbjct: 960 ctgaagccacccacagttgaacgacaacctgcgatactaccatatgtgaagggagttact 1019
Query: 179 gacagaataggcaacatcttgaagaaggttttgatcaagactatatacaaaccacacaag 238
||||||||||||||||||||||||||||||| || || ||||| ||||||||||| |||
Sbjct: 1020 gacagaataggcaacatcttgaagaaggtttccattaaaactatttacaaaccacataag 1079
Query: 239 agagggagccaattcttgtgacc 261
| || ||||||||||||| ||||
Sbjct: 1080 aaagtgagccaattcttgagacc 1102
>BF01049A2D11
Length = 776
Score = 178 bits (90), Expect = 1e-44
Identities = 145/162 (89%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 393 ttgtcatacattggacagacgaagaggagcatcggtacaaggattaaagaacacatctca 452
|||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||
Sbjct: 614 ttgtcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctca 673
Query: 453 gatatcaa-aaataggcgcgcgtcgaagtcagcagtgtgtgaacaaataatgcacaaagc 511
|| |||| ||||||| | | |||||||||||||| |||||||| | |||| ||||| |
Sbjct: 674 gaaatcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaacc 733
Query: 512 aggccactacattcggtttgataaaccacagatcctcactcg 553
|||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 734 aggccactacattcggtttgataaaccacaaatcctcgctcg 775
>BF01011A1H06
Length = 739
Score = 117 bits (59), Expect = 4e-26
Identities = 95/107 (88%)
Strand = Plus / Plus
Query: 715 gaaatcgatggtggtaggtgataaataacaaggaccaactgacagacagtcacatctcgt 774
||||||||||| || || |||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 406 gaaatcgatggcggcagttgatgaataacaaggaccaactgacagacactcacatctcgt 465
Query: 775 ctgcccgtggttatggttgctgtgaagtaaccaaaacgtcgggagta 821
||||||||| | | |||| ||| |||||||| ||||||||||||||
Sbjct: 466 ctgcccgtgatcacggttactgaaaagtaaccgaaacgtcgggagta 512
>BF14_729_C1
Length = 981
Score = 103 bits (52), Expect = 7e-22
Identities = 85/96 (88%)
Strand = Plus / Minus
Query: 176 actgacagaataggcaacatcttgaagaaggttttgatcaagactatatacaaaccacac 235
|||||||||||||||||||| ||||||||| ||| ||||||||||| ||||||||||
Sbjct: 134 actgacagaataggcaacattttgaagaagctttccatcaagactattcacaaaccacat 75
Query: 236 aagagagggagccaattcttgtgacctattaagagt 271
|||| || ||||||||||||| ||||||| ||||||
Sbjct: 74 aagaaagtgagccaattcttgagacctatcaagagt 39
>BF01017A2H11
Length = 713
Score = 91.7 bits (46), Expect = 2e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 748 accaactgacagacagtcacatctcgtctgcccgtggttatggttgctgtgaagtaacca 807
||||||||||| ||| |||||||||||||||||||| | | |||||||| |||||||||
Sbjct: 12 accaactgacatacactcacatctcgtctgcccgtgatcacggttgctgaaaagtaacca 71
Query: 808 aaacgtcgggagta 821
||||||||||||||
Sbjct: 72 aaacgtcgggagta 85
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 127,455
Number of extensions: 2205
Number of successful extensions: 2205
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2202
Number of HSP's successfully gapped: 7
Length of query: 1231
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1214
Effective length of database: 8,119,229
Effective search space: 9856744006
Effective search space used: 9856744006
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)