BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06485 (UTR included)
(2419 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 92 5e-18
BF14_335_C4 86 3e-16
BF01049B1F01 74 1e-12
BF01014B2F02 70 2e-11
>BF01019A1H08
Length = 504
Score = 91.7 bits (46), Expect = 5e-18
Identities = 101/118 (85%), Gaps = 6/118 (5%)
Strand = Plus / Minus
Query: 2144 cccttcaacctacacctgggttgcaagtcccaggcactcttgaagctcctttccctaca- 2202
||||| ||||||||||||||| |||| ||||||||||| ||||||||||| ||||| ||
Sbjct: 480 cccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaa 421
Query: 2203 ----atggaccc-gcacccgcaaggagaatccatggaatgctgagaggtttcgtctca 2255
|||||||| ||||||||| || |||||||| ||||||| ||||||||| |||||
Sbjct: 420 cgcgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcatctca 363
>BF14_335_C4
Length = 1491
Score = 85.7 bits (43), Expect = 3e-16
Identities = 101/117 (86%), Gaps = 5/117 (4%)
Strand = Plus / Plus
Query: 2144 cccttcaacctacacctgggttgcaagtcccaggcactcttgaagctcctttcc--cta- 2200
||||| ||||||||||||||| |||||||||||||||| ||||||||||| ||| | |
Sbjct: 1249 cccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcctgcaac 1308
Query: 2201 -caatgg-acccgcacccgcaaggagaatccatggaatgctgagaggtttcgtctca 2255
| |||| |||||| ||||| || ||||||||||||||||||||| ||||||||||
Sbjct: 1309 gcgatggtccccgcaaccgcacggtgaatccatggaatgctgagagttttcgtctca 1365
>BF01049B1F01
Length = 840
Score = 73.8 bits (37), Expect = 1e-12
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 2151 acctacacctgggttgcaagtcccaggcactcttgaagctcctttccct 2199
|||||||||||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 641 acctacacctgggtcgcaagtcccaggcactgttgaagctcctctccct 593
>BF01014B2F02
Length = 623
Score = 69.9 bits (35), Expect = 2e-11
Identities = 89/105 (84%), Gaps = 4/105 (3%)
Strand = Plus / Minus
Query: 2154 tacacctgggttgcaagtcccaggcactcttgaagctcctttccctacaa---tggaccc 2210
||||||||||| |||||||| |||| || |||||||||| ||||| ||| |||||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgctggaccc 564
Query: 2211 g-cacccgcaaggagaatccatggaatgctgagaggtttcgtctc 2254
| |||||||| || | ||||| ||||||||||||||||||||||
Sbjct: 563 ggcacccgcacggtgcatccactgaatgctgagaggtttcgtctc 519
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 308,810
Number of extensions: 6525
Number of successful extensions: 6525
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6524
Number of HSP's successfully gapped: 4
Length of query: 2419
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2402
Effective length of database: 8,119,229
Effective search space: 19502388058
Effective search space used: 19502388058
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)