BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06507 (UTR included)
(3460 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B1F12 1574 0.0
BF14_2404_C1 1174 0.0
>BF01060B1F12
Length = 798
Score = 1574 bits (794), Expect = 0.0
Identities = 797/798 (99%)
Strand = Plus / Plus
Query: 505 aggaaaacgctgtacttaagtggcaaaaagtttacaatcctagcggccctcaaccacgac 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggaaaacgctgtacttaagtggcaaaaagtttacaatcctagcggccctcaaccacgac 60
Query: 565 ctcgccatggccatcgtgcagttgccattaaagatttgatgatagttttcggcggcggaa 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcgccatggccatcgtgcagttgccattaaagatttgatgatagttttcggcggcggaa 120
Query: 625 atgaagggatagttcatgagcttcacgtcttcaataccaccacgaatcaatggtttgttc 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgaagggatagttcatgagcttcacgtcttcaataccaccacgaatcaatggtttgttc 180
Query: 685 ctgttacgaaaggagaggtgcctccaggatgcgccgcctacggcttcgtggtcgacggaa 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgttacgaaaggagaggtgcctccaggatgcgccgcctacggcttcgtggtcgacggaa 240
Query: 745 cacgtctcctggtttttggcggcatggtagagtacggcaagtattccaacgatctgtacg 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacgtctcctggtttttggcggcatggtagagtacggcaagtattccaacgatctgtacg 300
Query: 805 aattacaggcctcccggtgggaatggaaacgtctaaagcctctgccacccaagcaaggcc 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aattacaggcctcccggtgggaatggaaacgtctaaagcctctgccacccaagcaaggcc 360
Query: 865 taccaccatgcccaaggttaggtcatagctttactctcttaaatggtaaggtttacctgt 924
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 361 taccaccatgcccaaggttaggtcatagctttactctcttaaatggtaaggtttacctct 420
Query: 925 tcggtggactggccaatgagagcgacgatcctaagaacaacataccaagatatctcaatg 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcggtggactggccaatgagagcgacgatcctaagaacaacataccaagatatctcaatg 480
Query: 985 acctgtatacattggagctgtatccgaattcatctatgacggtatgggacatacccatca 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acctgtatacattggagctgtatccgaattcatctatgacggtatgggacatacccatca 540
Query: 1045 cttatggtcagtcaccacctcctcgcgagtcacatagtggtgtgagttacacagataaga 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cttatggtcagtcaccacctcctcgcgagtcacatagtggtgtgagttacacagataaga 600
Query: 1105 atactggaaaatcctcgttgatcatatatggaggtatgagcggctcacgtctcggtgacc 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atactggaaaatcctcgttgatcatatatggaggtatgagcggctcacgtctcggtgacc 660
Query: 1165 tgtgggtgcttgatgtggacagcatgacttggtctcggccagacctgggtggccctccac 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgtgggtgcttgatgtggacagcatgacttggtctcggccagacctgggtggccctccac 720
Query: 1225 cactaccccgctctcttcacacagcaactgtcattggacatcacatgtatgtgtatggcg 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cactaccccgctctcttcacacagcaactgtcattggacatcacatgtatgtgtatggcg 780
Query: 1285 gttgggtgccattggttc 1302
||||||||||||||||||
Sbjct: 781 gttgggtgccattggttc 798
>BF14_2404_C1
Length = 1171
Score = 1174 bits (592), Expect = 0.0
Identities = 604/607 (99%), Gaps = 2/607 (0%)
Strand = Plus / Plus
Query: 2854 cactaccacccaataagctgcagctcggcaagacaggtgttggaggcaagcagaccatag 2913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cactaccacccaataagctgcagctcggcaagacaggtgttggaggcaagcagaccatag 61
Query: 2914 ttatcaccaagtcagcgagtcagtcacaacaggggcaaccgcagtgaagcagtcgaagac 2973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttatcaccaagtcagcgagtcagtcacaacaggggcaaccgcagtgaagcagtcgaagac 121
Query: 2974 cctcggcttgagagataccagtgcccttagcgtgccggctattgttggtagactagaaat 3033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cctcggcttgagagataccagtgcccttagcgtgccggctattgttggtagactagaaat 181
Query: 3034 catctctagattgtacattacgatgaggaacactaaagtgaagttgataaaggatgtgat 3093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 catctctagattgtacattacgatgaggaacactaaagtgaagttgataaaggatgtgat 241
Query: 3094 ggtcacctgactctatgttattgggtctgtctgtagggaatgtcctcttagagtttttac 3153
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 242 ggtcacctgactctatgttattgggtccgtctgtagggaatgtcctcttagagtttttac 301
Query: 3154 tgaaacatattatttactcttgtaattattttccaagttgtctgtttgcgttaggtcccg 3213
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgaaac--attatttactcttgtaattattttccaagttgtctgtttgcgttaggtcccg 359
Query: 3214 tatctttaacgatctgtgaagttgttatggtgcaggtggacgtttgttgcccgccccctg 3273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tatctttaacgatctgtgaagttgttatggtgcaggtggacgtttgttgcccgccccctg 419
Query: 3274 tatgagctagttgtactgataatgcaaagtgcctgccgagttgctccgctgcagtgtaag 3333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tatgagctagttgtactgataatgcaaagtgcctgccgagttgctccgctgcagtgtaag 479
Query: 3334 taaagtaggagggcgaagggatgtagactatcactttttaatataaatcaattagatttt 3393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 taaagtaggagggcgaagggatgtagactatcactttttaatataaatcaattagatttt 539
Query: 3394 aaaagattattcaatttgaggttttattttatgtgtttatagatttattcctaaattaga 3453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aaaagattattcaatttgaggttttattttatgtgtttatagatttattcctaaattaga 599
Query: 3454 atatttt 3460
|||||||
Sbjct: 600 atatttt 606
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 319,634
Number of extensions: 5875
Number of successful extensions: 5875
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5874
Number of HSP's successfully gapped: 2
Length of query: 3460
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3442
Effective length of database: 8,109,745
Effective search space: 27913742290
Effective search space used: 27913742290
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)