BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06508 (UTR included)
(3064 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057B2H05 1402 0.0
BF14_1341_C1 74 1e-12
BF01021A2F10 72 6e-12
>BF01057B2H05
Length = 811
Score = 1402 bits (707), Expect = 0.0
Identities = 787/812 (96%), Gaps = 2/812 (0%)
Strand = Plus / Plus
Query: 1155 gaaaaatcaggaagcagatctagatcgcactcaaaatccagatccagaagtaaatctaag 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaaaatcaggaagcagatctagatcgcactcaaaatccagatccagaagtaaatctaag 60
Query: 1215 tcaagatccagaagcaaatcgaagtcgaagtcaaaaagccgttcgcgatcacgttcgaag 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaagatccagaagcaaatcgaagtcgaagtcaaaaagccgttcgcgatcacgttcgaag 120
Query: 1275 agttctaacgcttcagatgtcggcggtaagaagaaaagctccgtgctatctgactcggag 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agttctaacgcttcagatgtcggcggtaagaagaaaagctccgtgctatctgactcggag 180
Query: 1335 agtgatgctgggcagaaaggtcccaaacgtaagaaagattcagacagcggctccgacacg 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtgatgctgggcagaaaggtcccaaacgtaagaaagattcagacagcggctccgacacg 240
Query: 1395 agcaacaaacctaagaagaagacaaagaaacttgactctgatgatgacaatcaggaggcg 1454
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 241 agcaacaaacctaagaagaagacgaagaaacttgactctgatgatgataatcaggaggcg 300
Query: 1455 accgtgacagctgatgcgttattcggcgacgcgtccgacatcagtactgacaatgagggt 1514
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 301 accgtgacagctgatgcgttattcggcgacgcgtccgacatcagtacggacaatgagggt 360
Query: 1515 gagaaggaaaggtcgaggtcgaggtccaagtcgaggtcgaggtcacgcagccgcagcagg 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagaaggaaaggtcgaggtcgaggtccaagtcgaggtcgaggtcacgcagccgcagcagg 420
Query: 1575 tccggtgacgagaggcgctcagacgacgccaaggggagtggagacgaggaaaatagggag 1634
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tccggtgacgagaggcgctcggacgacgccaaggggagtggagacgaggaaaatagggag 480
Query: 1635 aaacccgaagaggaagaggagattgagatcccagaaactcgtatagatgtggacatgcct 1694
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 481 aaacccgaagaggaagaggagattgagatccctgaaactcgtatagatgtggacatgcct 540
Query: 1695 aaaatatggacggaacttggcaaggaattgcatttcgtgaagcttcccaattttttgtca 1754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaatatggacggaacttggcaaggaattgcatttcgtgaagcttcccaattttttgtca 600
Query: 1755 gtggaaactaggccttacgatccaaatacatatgaagatgagattgatgaagaagaaacg 1814
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 601 gtggaaactaggccttacgatccaaatacatatgaagacgagattgatgaagaagaaacg 660
Query: 1815 ctcgatgaagaaggtcgtgcgaggttgaagctcaaagtggagaatacgtatgcgaccgcc 1874
||||||||||||||||||||||||||||||||| ||||||||||| || || ||
Sbjct: 661 ctcgatgaagaaggtcgtgcgaggttgaagctcnnngtggagaatac-aatacgctggcg 719
Query: 1875 tgccacaagc-ttaaagaaggtaacgctgtgaaggaatccaacgcgcggatggtgaagtg 1933
| | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gacgatgttcgataaagaaggtaacgctgtgaaggaatccaacgcgcggatggtgaagtg 779
Query: 1934 gtccgacgggagcatgtccttacacctcggct 1965
||||||||||||||||||||||||||||||||
Sbjct: 780 gtccgacgggagcatgtccttacacctcggct 811
>BF14_1341_C1
Length = 1009
Score = 73.8 bits (37), Expect = 1e-12
Identities = 49/52 (94%), Gaps = 2/52 (3%)
Strand = Plus / Plus
Query: 235 ataaggctcaaaaggactcgtatccagagccg--aaaaacattaacaaaaaa 284
|||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 940 ataaggctcaaaaggactcgtatccagagccgtaaaaaacatttacaaaaaa 991
>BF01021A2F10
Length = 792
Score = 71.9 bits (36), Expect = 6e-12
Identities = 46/48 (95%), Gaps = 1/48 (2%)
Strand = Plus / Minus
Query: 238 aggctcaaaaggactcgtatccagagccg-aaaaacattaacaaaaaa 284
||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 97 aggctcaaaaggactcgtatccagagccgtaaaaacatttacaaaaaa 50
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 317,908
Number of extensions: 6504
Number of successful extensions: 6504
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6498
Number of HSP's successfully gapped: 4
Length of query: 3064
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3046
Effective length of database: 8,109,745
Effective search space: 24702283270
Effective search space used: 24702283270
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)