BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06535 (UTR included)
(4333 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A2A11 1515 0.0
BF01034A2E04 741 0.0
>BF01017A2A11
Length = 797
Score = 1515 bits (764), Expect = 0.0
Identities = 784/793 (98%)
Strand = Plus / Plus
Query: 2898 gagcctccggggcgcaccatgagaccggacaagatggttataatactcagaggtccaccg 2957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gagcctccggggcgcaccatgagaccggacaagatggttataatactcagaggtccaccg 64
Query: 2958 ggaagtggtaaatcttatttagctaaactgataagagataaagaagccgagcacgggggc 3017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ggaagtggtaaatcttatttagctaaactgataagagataaagaagccgagcacgggggc 124
Query: 3018 acagcaagaataatgtccatagacgattatttcatgcaggaaggtgaaattgaagaaaaa 3077
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 acggcaagaataatgtccatagacgattatttcatgcaggaaggtgaaattgaagaaaaa 184
Query: 3078 gatcccattacgggaaaaattgtgaagaagccgtcactgaaatacgaatacgacgagagc 3137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gatcccattacgggaaaaattgtgaagaagccgtcactgaaatacgaatacgacgagagc 244
Query: 3138 tccgaggaatcatatatgacatcgctaaagcgggcgttcaagaggagtatcacggatggc 3197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tccgaggaatcatatatgacatcgctaaagcgggcgttcaagaggagtatcacggatggc 304
Query: 3198 tactttacattcttaatatatgacgccgtgaacgatcagttgaagtcctatgctgatatt 3257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tactttacattcttaatatatgacgccgtgaacgatcagttgaagtcctatgctgatatt 364
Query: 3258 tggaatttctcaaggcagaatggcttccaggtgtacatatgtacgatggaaatggatccc 3317
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 365 tggaatttctcaaggcagaatggcttccaggtgtacatatgtactatggaaatggatccc 424
Query: 3318 caagcttgcttcaagaggaacatacacaatagatcgttgcaagacatagaagctatagtt 3377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 caagcttgcttcaagaggaacatacacaatagatcgttgcaagacatagaagctatagtt 484
Query: 3378 tctagttttttcccaaccccagcacatcacatacagttggatccgacgaccttactccag 3437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tctagttttttcccaaccccagcacatcacatacagttggatccgacgaccttactccag 544
Query: 3438 agtgcgtccattcgggaagtacaaatggaagacgccgatgacgtcactatggaggaggtg 3497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 agtgcgtccattcgggaagtacaaatggaagacgccgatgacgtcactatggaggaggtg 604
Query: 3498 gaaaaccctgaggtcgataatagttttacgtcgaaatgggaaaaaatggaagacgccgcc 3557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gaaaaccctgaggtcgataatagttttacgtcgaaatgggaaaaaatggaagacgccgcc 664
Query: 3558 caactagctcgtctcgacggcactagtcggccgctgcgctcgtcccagctctccatggaa 3617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 caactagctcgtctcgacggcactagtcggccgctgcgctcgtcccagctctccatggnn 724
Query: 3618 gactacctacagttagacgactggaaaccgaatacggctaaaccgggaaagaaaactgta 3677
|||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 725 nactacctacagttagacgactggannncgaatacggctaaaccgggaangaaaactgta 784
Query: 3678 cgttgggctgata 3690
|||||||||||||
Sbjct: 785 cgttgggctgata 797
>BF01034A2E04
Length = 727
Score = 741 bits (374), Expect = 0.0
Identities = 390/395 (98%), Gaps = 1/395 (0%)
Strand = Plus / Plus
Query: 3508 aggtcgataatagttttacgtcgaaatgggaaaaaatggaagacgccgcccaactagctc 3567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aggtcgataatagttttacgtcgaaatgggaaaaaatggaagacgccgcccaactagctc 392
Query: 3568 gtctcgacggcactagtcggccgctgcgctcgtcccagctctccatggaagactacctac 3627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gtctcgacggcactagtcggccgctgcgctcgtcccagctctccatggaagactacctac 452
Query: 3628 agttagacgactggaaaccgaatacggctaaaccgggaaagaaaactgtacgttgggctg 3687
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 453 agttagacgactggaaaccgaatacggctaaaccaggaaagaaaactgtacgttgggctg 512
Query: 3688 atattgaagagagaagacagcaagagaaaatgcgagccatcggttttgtcgtaggtcaaa 3747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atattgaagagagaagacagcaagagaaaatgcgagccatcggttttgtcgtaggtcaaa 572
Query: 3748 ctgattggaatagaatgactgaccccactatggggtctagtgcgctcacgcaaactaaat 3807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ctgattggaatagaatgactgaccccactatggggtctagtgcgctcacgcaaactaaat 632
Query: 3808 atatcgagcgagtcaggcggcattgaagattttgatatttcatgtgcacaggtgttctat 3867
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 atatcgagcgagtcnnncggcattgaagattttgatatttcatgtgcacaggtgttctat 692
Query: 3868 atatatttttatatatacagg-tgttcatgaaaac 3901
||||||||||||||||||||| |||||||||||||
Sbjct: 693 atatatttttatatatacaggatgttcatgaaaac 727
Score = 194 bits (98), Expect = 8e-49
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 3414 ttggatccgacgaccttactccagagtgcgtccattcgggaagtacaaatggaagacgcc 3473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggatccgacgaccttactccagagtgcgtccattcgggaagtacaaatggaagacgcc 60
Query: 3474 gatgacgtcactatggaggaggtggaaaaccctgaggt 3511
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgacgtcactatggaggaggtggaaaaccctgaggt 98
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 587,281
Number of extensions: 12993
Number of successful extensions: 12993
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 12990
Number of HSP's successfully gapped: 3
Length of query: 4333
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4315
Effective length of database: 8,109,745
Effective search space: 34993549675
Effective search space used: 34993549675
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)