BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06557 (UTR included)
(2764 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1580_C1 1479 0.0
BF01055A1E11 940 0.0
>BF14_1580_C1
Length = 770
Score = 1479 bits (746), Expect = 0.0
Identities = 764/770 (99%)
Strand = Plus / Plus
Query: 382 attttttaatgttgttaagtgaagaaaaatgtttcattattttactaaaattactagaaa 441
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 1 attttttaatgttgttaagtgacgaaaaatgtttcattatttcactaaaattactagaaa 60
Query: 442 tatattagttatgtgcttttgaattacgtatcgcacttaattattgacaaaatatcaata 501
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 61 tatattagttatgtgcttttgaattacgtatcgcacttaattattgacaaaaaatcaata 120
Query: 502 tgcctccaaccgtacaaactaacgagccagaacgagaaaagcgtcctcaaagaactggag 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcctccaaccgtacaaactaacgagccagaacgagaaaagcgtcctcaaagaactggag 180
Query: 562 agagaagatcggagcttgttactcgggttaaatattgcaataccttaccggatataccat 621
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 agagaagatcggagcttgttactcgagttaaatattgcaataccttaccggatataccat 240
Query: 622 tcgatttaaaattccttacatatccattttcttctactcgttttattcaatataatccga 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgatttaaaattccttacatatccattttcttctactcgttttattcaatataatccga 300
Query: 682 cctctttggaaaaaaattatcgctatgaagtactaacagaacacgatcttggtgtccata 741
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctctttggaaaaaaattatcgttatgaagtactaacagaacacgatcttggtgtccata 360
Query: 742 ttgatttgataaatcgagatatctaccaaggagatggtaatgcacaattagatccagcag 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgatttgataaatcgagatatctaccaaggagatggtaatgcacaattagatccagcag 420
Query: 802 atgaaaagcttttagaagatgacgttcttacgcctcaggattcgaagcgttcccgacatc 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgaaaagcttttagaagatgacgttcttacgcctcaggattcgaagcgttcccgacatc 480
Query: 862 atgccaaaagcgtatcctggctgcgccgttcggaatacatttcaacagaacaaaccagat 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atgccaaaagcgtatcctggctgcgccgttcggaatacatttcaacagaacaaaccagat 540
Query: 922 ttcaaccccagtctatggaaaaggttgaagcgaaagttggttacaatgtcaagaaaatat 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcaaccccagtctatggaaaaggttgaagcgaaagttggttacaatgtcaagaaaatat 600
Query: 982 tcagcgaagaaacattatacatggatagagatagtcaaattaaagctattgaaaagacat 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcagcgaagaaacattatacatggatagagatagtcaaattaaagctattgaaaagacat 660
Query: 1042 ttgaggataacaagaagacaattgagaagcattatagcaaacccggagtcactccggttg 1101
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgaggataacaagaagacgattgagaagcattatagcaaacccggagtcactccggttg 720
Query: 1102 agataatgcctgttttccccgactttgaaatgtggaagtacccatgcgct 1151
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agataatgcctgttttccccgactttgaaatgtggaagtacccatgcgct 770
>BF01055A1E11
Length = 565
Score = 940 bits (474), Expect = 0.0
Identities = 533/552 (96%), Gaps = 8/552 (1%)
Strand = Plus / Plus
Query: 1759 gatctcgctccaggtccaaatctaggtcaaggtcggcgtcggggtctccagcacgttcca 1818
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 1 gatctcgctccaggtccaaatctaggtcaaggtctccgtcgggctctccagcacgttcca 60
Query: 1819 agtccaagtccaggtcgcggtcccgcagccagtccggctctaggaagtcgaggtccaggt 1878
|||||| |||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 agtcca------ggtctcggtcccgcagccagtccggctctaggaagtcaaggtccaggt 114
Query: 1879 ccgcatcagctcaatctggatcggccaggtctgggtcggctcgttcccgttctggttcca 1938
||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 115 ccgcatcagct--atctggatcagccaggtctgggtcggctcgttcccgttctggttcca 172
Query: 1939 gggcttcatctcgcgccagttccaagagcaaagcgtccagcagacggtccaggtccaggt 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gggcttcatctcgcgccagttccaagagcaaagcgtccagcagacggtccaggtccaggt 232
Query: 1999 ctagaagaagctctaagggcagtgataaggggtccaagcagtcgtcgcgggcgtcgtctc 2058
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 233 ctagaagaagctctaagggcagtgaaaaggggtccaagcagtcgtcgcgggcgtcgtctc 292
Query: 2059 gtgcgtcgtcggtcgcttcgcggtcgtcccgcaaatcttcccgtgcctcgtccgcgtcga 2118
||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 293 gtgcgtcgtcggtcgtgtcgcggtcgtcccgcaagtcgtcccgtgcctcgtccgcgtcga 352
Query: 2119 agtcgtctcgcaagtcttcccgggccagctcccgcgccaggtccagcggatcacgttcca 2178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agtcgtctcgcaagtcttcccgggccagctcccgcgccaggtccagcggatcacgttcca 412
Query: 2179 gaagcaggtctgccagcggttcaagacaaggttccagaagcggttccgcatcaagtgcct 2238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gaagcaggtctgccagcggttcaagacaaggttccagaagcggttccgcatcaagtgcct 472
Query: 2239 catcacgtcattcaggctccgattgagatcagattacattgtgacatcattaaaccattt 2298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 catcacgtcattcaggctccgattgagatcagattacattgtgacatcattaaaccattt 532
Query: 2299 atgataacaaaa 2310
||||||||||||
Sbjct: 533 atgataacaaaa 544
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,409
Number of extensions: 6992
Number of successful extensions: 6992
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6991
Number of HSP's successfully gapped: 3
Length of query: 2764
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2747
Effective length of database: 8,119,229
Effective search space: 22303522063
Effective search space used: 22303522063
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)