BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06590 (UTR included)
(2584 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2616_C1 1705 0.0
>BF14_2616_C1
Length = 1083
Score = 1705 bits (860), Expect = 0.0
Identities = 905/920 (98%)
Strand = Plus / Plus
Query: 1665 gagaggcggctcagggacctgtcctctcggggctcctccgccgacagggaagaccaccgc 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagaggcggctcagggacctgtcctctcggggctcctccgccgacagggaagaccaccgc 60
Query: 1725 cgccgggacaagacacaggcgcggacacgtactggcgccactaccggcagtacgggcagc 1784
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 cgccgggacaagacacaggcgcggacacgtactggcgccactactggcagtacgggcagc 120
Query: 1785 aagtccagcggcagcggtacagctacaggcgccacgagtggagctggcaccgagcacacc 1844
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 aagtccagcggcagcggtacagctacaggcgccgcgagtggagctggcaccgagcacacc 180
Query: 1845 gtggtcgtggttaacttcctggacgagagcgtcccttacagattcaaggtgcccgcctcg 1904
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggttgtggttaacttcctggacgagagcgtcccttacagattcaaggtgcccgcctcg 240
Query: 1905 ccgctcaccctgcgcacgtttaaggaatatctgcccaggaagggaaactatagatacttc 1964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgctcaccctgcgcacgtttaaggaatatctgcccaggaagggaaactatagatacttc 300
Query: 1965 ttcaagacggagtgcgcggacctcgacaacacggtcatacaggaggaggtgagcagcgac 2024
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcaagacggagtgcgcggacctcgacaacacggtcatacaggaggaggtgagcagcgac 360
Query: 2025 ggagacacgctgcccatgtacgaggggaaggtcatggccagggtcaagagcatcgagtga 2084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggagacacgctgcccatgtacgaggggaaggtcatggccagggtcaagagcatcgagtga 420
Query: 2085 acgcccgtgcagctcacaccacgaggatacagcgggcggactactatatatactaacgac 2144
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 421 acgcccgtgcagctcacaccacgaggatacagcgggccgactactatatatactaacgac 480
Query: 2145 gatgtgcatgctctagcatcaccctgtatctgagacattgttttgaggaatgactcttag 2204
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 481 aatatgcatgctctaacatcaccctgtatctgagacattgttttgaggaatgacacttag 540
Query: 2205 ataagcacagactgtcgcccggccgccggcgcggtgctgcggtgaaatgagtgggggagt 2264
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 541 ataagcacagactgtcgcccggccgccggcacggtgctgcggtgaaatgagtaggggagt 600
Query: 2265 agtcggctcgggccgcgttttaagaattctatgaacagattgtcgaatgtaactataata 2324
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 601 agtcggctcgggccgagttttaagatttctatgaacagattgtcgaatgtaactataata 660
Query: 2325 aactaaatccttccagaagccaaggttcaggcggcggtcaggcgcggcggccggcgccca 2384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aactaaatccttccagaagccaaggttcaggcggcggtcaggcgcggcggccggcgccgg 720
Query: 2385 ctcgggtatattgtaaattatttattatgataatattaataactgtgacactgaacgtcg 2444
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 721 ctcgggtatattgtaaattatttattataataatattaataactgtgacactgaacgtcg 780
Query: 2445 taacgactatacgatacgttcgccgtaaagaaaattctgttcctcgacgatataagcttc 2504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 taacgactatacgatacgttcgccgtaaagaaaattctgttcctcgacgatataagcttc 840
Query: 2505 taattattattattattattattgtatatttttttaatgaatcggttggatgcgctgacg 2564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 taattattattattattattattgtatatttttttaatgaatcggttggatgcgctgacg 900
Query: 2565 gctgtatcatatattgttga 2584
||||||||||||||||||||
Sbjct: 901 gctgtatcatatattgttga 920
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 200,496
Number of extensions: 4635
Number of successful extensions: 4635
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4629
Number of HSP's successfully gapped: 1
Length of query: 2584
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2567
Effective length of database: 8,119,229
Effective search space: 20842060843
Effective search space used: 20842060843
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)