BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06594 (UTR included)
(2605 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3182_C1 1235 0.0
>BF14_3182_C1
Length = 779
Score = 1235 bits (623), Expect = 0.0
Identities = 632/635 (99%)
Strand = Plus / Plus
Query: 482 agtgctctcgtcaaccagtatgcttggtggtaatgtcatttggttccgtcacggtctccg 541
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 agtgccctcgtcaaccagtatgcttggtggtaatgtcatttggttccgtcacggtctccg 204
Query: 542 tctccacgacaacccttcgcttcacagcgctctggaagatgcaagctcaccgttcttccc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tctccacgacaacccttcgcttcacagcgctctggaagatgcaagctcaccgttcttccc 264
Query: 602 tatattcatatttgatggagagacagctggtacaaagatggtgggctacaatcgtatgcg 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatattcatatttgatggagagacagctggtacaaagatggtgggctacaatcgtatgcg 324
Query: 662 atacctgctggaggcgctgaacgatttggaccagcagttcaggaagtacggcgggaagct 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atacctgctggaggcgctgaacgatttggaccagcagttcaggaagtacggcgggaagct 384
Query: 722 gctcatgattaaggggagacctgatttaatattcaggaggctgtgggaggaatttggtat 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctcatgattaaggggagacctgatttaatattcaggaggctgtgggaggaatttggtat 444
Query: 782 acgtacgctatgcttcgagcaggactgtgagccaatatggcgtccgcgcgacgcgagcgt 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acgtacgctatgcttcgagcaggactgtgagccaatatggcgtccgcgcgacgcgagcgt 504
Query: 842 gcgtgctctgtgccgcgacataggcgtgtcgtgccgcgagcacgtcgcacacacgctgtg 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcgtgctctgtgccgcgacataggcgtgtcgtgccgcgagcacgtcgcacacacgctgtg 564
Query: 902 gaacccggacacagtcatcaaggccaatggaggaataccgccgcttacataccagatgtt 961
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 565 gaacccggacacagtcatcaaggccaatggaggaataccgccgcttacgtaccagatgtt 624
Query: 962 cctgcatacagttgaaatcatcggtaatcctccgcgtcccgtagacgacgtcgacctgaa 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cctgcatacagttgaaatcatcggtaatcctccgcgtcccgtagacgacgtcgacctgaa 684
Query: 1022 cggcgtcaacttcggatcgctgcctgagagcttttacagggaattcgttgtctttgataa 1081
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 685 cggcgtcaacttcggatcgctgcctgagagcttctacagggaattcgttgtctttgataa 744
Query: 1082 ggccccaaaaccagaagatctgggtgtgtttctgg 1116
|||||||||||||||||||||||||||||||||||
Sbjct: 745 ggccccaaaaccagaagatctgggtgtgtttctgg 779
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 390,674
Number of extensions: 30245
Number of successful extensions: 30245
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 30245
Number of HSP's successfully gapped: 1
Length of query: 2605
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2588
Effective length of database: 8,119,229
Effective search space: 21012564652
Effective search space used: 21012564652
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)