BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06599 (UTR included)
(2980 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019B2B06 1289 0.0
BF01048B2F03 523 e-148
BF01024B1D01 70 2e-11
>BF01019B2B06
Length = 674
Score = 1289 bits (650), Expect = 0.0
Identities = 668/674 (99%)
Strand = Plus / Plus
Query: 1110 attggctccgaaatattctatgacgatgatttaattataggatcgacagagtccatcggt 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attggctccgaaatattctatgacgatgatttaattataggatcgacagagtccatcggt 60
Query: 1170 tccgagttagatgtgacagatgttgtagcaacgagtcttaccaagcagcaaagagacaaa 1229
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 tccgagttagatgtgacagatgttgtagcaacgagtctcaccaagcagcaaagagacaaa 120
Query: 1230 acgaaagtgttaaggaagaatggaaaccacagaagaaaagtgtccagaaacttcgataga 1289
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 acgaaagtgttaaggaagaacggaaaccacagaagaaaagtctccagaaacttcgataga 180
Query: 1290 aataggagcaaggattttcttaaatcaccacatagaagaaaaaaagattccagcttgtca 1349
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 aataggagcaaggattttcttaaatcaccacatagaagaaaaaaggattccagcttgtca 240
Query: 1350 gatgatagtgtgaaaagtccaaagatgcagattgttctgggctctgggctggctctgcct 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgatagtgtgaaaagtccaaagatgcagattgttctgggctctgggctggctctgcct 300
Query: 1410 gtgtcagaaggtgaagaagtgataaaaatagagaagaagcccgacttagatggtgaaagt 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtgtcagaaggtgaagaagtgataaaaatagagaagaagcccgacttagatggtgaaagt 360
Query: 1470 gatatagaagtggatgtaggcagtgattctgataaagatatatatataccaaaaaataaa 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatatagaagtggatgtaggcagtgattctgataaagatatatatataccaaaaaataaa 420
Query: 1530 acagtcaaagaggttgttcacgaagaggttccagttgctgtgccattgagaaaatttgaa 1589
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acagccaaagaggttgttcacgaagaggttccagttgctgtgccattgagaaaatttgaa 480
Query: 1590 cccatgcccagaagaaatcggaaaattaacttagacggcggtggtggttacacgataatg 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cccatgcccagaagaaatcggaaaattaacttagacggcggtggtggttacacgataatg 540
Query: 1650 cacacggaagctggtgacatgtatgagataggtcaagaacctcggaaagagagacagcaa 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cacacggaagctggtgacatgtatgagataggtcaagaacctcggaaagagagacagcaa 600
Query: 1710 agaaaacaagcggtccaacttataccgttgcatgtttataactctgagaaaccggcgccg 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agaaaacaagcggtccaacttataccgttgcatgtttataactctgagaaaccggcgccg 660
Query: 1770 tgtgccgtgcacat 1783
||||| ||||||||
Sbjct: 661 tgtgcggtgcacat 674
>BF01048B2F03
Length = 718
Score = 523 bits (264), Expect = e-148
Identities = 285/293 (97%)
Strand = Plus / Plus
Query: 1950 gtgtcccagtcgtcgtcggcggagtccctccggtgtcgtggtgtgagtgtgtgtggttgg 2009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gtgtcccagtcgtcgtcggcggagtccctccggtgtcgtggtgtgagtgtgtgtggttgg 485
Query: 2010 catcactcccacccccagttcccgccctctccgtccgtgagagacctcgtcagtcaacgc 2069
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 486 catcactcccacccccagttcccgccctctccgtccgtgagggacctcgtcagtcaacgc 545
Query: 2070 tcgctccagagcctcgcctggggtctgccgtgtgtggcgctggtcacctcccagcactgg 2129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tcgctccagagcctcgcctggggtctgccgtgtgtggcgctggtcacctcccagcactgg 605
Query: 2130 cctcccggacgcagagcctcgcaactcagatgtttccgtgtagaagaggacgacaagctt 2189
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |
Sbjct: 606 cctcccggacgcagagcctcgcaactcagatgtttccgggtagaagaggacgacaaacat 665
Query: 2190 gacactccggaggtccccgcgggctaccagctcaatgtgaagttggagcgtga 2242
| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gccactccggnnntccccgcgggctaccagctcaatgtgaagttggagcgtga 718
Score = 99.6 bits (50), Expect = 2e-20
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 1897 tgtacaggactgtgcgggccgccgccgcacacacgcactgcgacatggacccgg 1950
|||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtacaggacagtgcgggccgccgccgcacacacgcactgcgacatggacccgg 54
>BF01024B1D01
Length = 783
Score = 69.9 bits (35), Expect = 2e-11
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 2850 gtccgcgaacgaactcgaaacttttttaaattttattaatgtttaaataccatattgttg 2909
||||||||||||| || ||||| |||| ||||||||| |||||| |||| |||||| |||
Sbjct: 710 gtccgcgaacgaattc-aaactcttttcaattttattgatgttttaataacatatttttg 768
Query: 2910 ttgatacgaaataca 2924
||||||| |||||||
Sbjct: 769 ttgataccaaataca 783
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 352,971
Number of extensions: 11492
Number of successful extensions: 11492
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 11492
Number of HSP's successfully gapped: 4
Length of query: 2980
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2962
Effective length of database: 8,109,745
Effective search space: 24021064690
Effective search space used: 24021064690
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)