BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06623 (UTR included)
(1900 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022B1H06 1150 0.0
>BF01022B1H06
Length = 719
Score = 1150 bits (580), Expect = 0.0
Identities = 613/624 (98%)
Strand = Plus / Plus
Query: 949 aggcatgggcggaagcattggcagccacccagtcaggaacgggtacaccagaacagaaag 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 aggcatgggcggaagcattggcagccacccagtcaggaacgggtacaccagaacagaaag 155
Query: 1009 ccaagggttcaagttggccgatactactgttcttcggagtcatagcagctgcaccataca 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ccaagggttcaagttggccgatactactgttcttcggagtcatagcagctgcaccataca 215
Query: 1069 ttgtcctcaaaatgcttaacggcatctcatcgagtatacacgagagattaaatgacccct 1128
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 216 ttgtcctcaaaatgcttaacggcatctcatcgagtatacacgagagattaaacgacccct 275
Query: 1129 ctagctggcagaatcctcttcgcgctgtggctcaacacgacttccaagctacttcccctc 1188
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 276 ctagctggcagaatcctcttcgcgctgtggctcaacacgatttccaagctacttcccctc 335
Query: 1189 aggaaatcagcttcacaacggaccaggtcctaaccttggctccccaacatctccaaggtc 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aggaaatcagcttcacaacggaccaggtcctaaccttggctccccaacatctccaaggtc 395
Query: 1249 acctttggaattcaggctggctcatggcatccgctgacagacacacagctggcctggtgc 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 acctttggaattcaggctggctcatggcatccgctgacagacacacagctggcctggtgc 455
Query: 1309 cagtcacgtacatcaaagtaatcaaaccaagcgatacaaataaagcagaacccacagacg 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cagtcacgtacatcaaagtaatcaaaccaagcgatacaaataaagcagaacccacagacg 515
Query: 1369 acttgcacaaatattataatcaggaattgtaagactatatgtggcaacattatatgactt 1428
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 516 acttgcacaaatattataatcaggaattgtaagactatatatggcaacattatatgactt 575
Query: 1429 atacgtaatgatcgtgtttttgtattttggtgtaaagcgtcggttatggagattaatgtg 1488
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 576 atacgtaatgatcgtgtttttgtatttcggtgtaaagcgtcggttatggagattaatgtg 635
Query: 1489 tatatattcctattaataatataaatcgcgtactgaattttagattcagagaatatgcta 1548
||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 636 tatatattcttattaataatataaatcgcgtactgaatcgtagattcagagaatatgtga 695
Query: 1549 ttgtcttctccaaagcttgttctc 1572
| |||||||||||||||||||||
Sbjct: 696 ctatcttctccaaagcttgttctc 719
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,586
Number of extensions: 8785
Number of successful extensions: 8785
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8785
Number of HSP's successfully gapped: 1
Length of query: 1900
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1883
Effective length of database: 8,119,229
Effective search space: 15288508207
Effective search space used: 15288508207
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)