BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06626 (UTR included)
(1591 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A2B12 1160 0.0
>BF01033A2B12
Length = 863
Score = 1160 bits (585), Expect = 0.0
Identities = 623/639 (97%)
Strand = Plus / Plus
Query: 486 ttggtgttgaccgtcatgctattgacaatcatagtttacatatacaccgtcatagcgttc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ttggtgttgaccgtcatgctattgacaatcatagtttacatatacaccgtcatagcgttc 284
Query: 546 aacttcttcagaaagttctacgtccaggaagaagacgatgaagtgaataggaactgtcat 605
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 aacttcttcaggaagttctacgtccaggaagaagacgatgaagtgaataggaactgtcat 344
Query: 606 gacatgctgacgtgcttcgtattcaacctgtacaagggtgttcgagctggtggtggtatc 665
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 345 gacatgctgacgtgcttcgtattcaacttgtacaagggtgttcgagctggcggtggtatc 404
Query: 666 ggtgatgagttagagcctcctgacggcgatgactccgaagtctaccgcatcatcttcgat 725
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ggtgatgagttagagcctcccgacggcgatgactccgaagtctaccgcatcatcttcgac 464
Query: 726 atctcattcttcttcttcgtcattgttatcctgctcgctatcttacagggtttgatcatc 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atctcattcttcttcttcgtcattgttatcctgctcgctatcttacagggtttgatcatc 524
Query: 786 gacgccttcggtgagctccgtgaccagctcgagtccgtcaaagaggacatggagtcaaac 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gacgccttcggtgagctccgtgaccagctcgagtccgtcaaagaggacatggagtcaaac 584
Query: 846 tgcttcatatgcggcatcaataaagattactttgataaggtgccacacggattcgacaca 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tgcttcatatgcggcatcaataaagattactttgataaggtgccacacggattcgacaca 644
Query: 906 cacgtccagcgcgagcacaacctcgctaactacatgttcttcctcatgcatctcatcaat 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 cacgtccagcgcgagcacaacctcgctaactacatgttcttcctcatgcatctcatcaat 704
Query: 966 aaaccggacacagaatatacaggtcaagagacatttgtatggaacatgtatacacagaga 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aaaccggacacagaatatacaggtcaagagacatttgtatggaacatgtatacacagaga 764
Query: 1026 tgttgggacttcttcccagtcggagattgtttcagaaaacaatacgaagatgcaatggga 1085
||||||||||||||||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 765 tgttgggacttcttcccagtcggnnattgtttcannnnncaatacgannatgcaatggga 824
Query: 1086 gagtagaattatcaaagcttttgtcccttttattactat 1124
|| ||||||||||||||||||||||||||| ||||||||
Sbjct: 825 gantagaattatcaaagcttttgtccctttcattactat 863
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 208,354
Number of extensions: 12677
Number of successful extensions: 12677
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12676
Number of HSP's successfully gapped: 1
Length of query: 1591
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1574
Effective length of database: 8,119,229
Effective search space: 12779666446
Effective search space used: 12779666446
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)