BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06657 (UTR included)
(2773 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2773_C1 476 e-133
BF01012A1B09 123 2e-27
BF14_729_C3 115 4e-25
BF01024A1H07 100 2e-20
BF01019B1G10 84 1e-15
BF14_729_C2 82 5e-15
BF01056A1B08 74 1e-12
BF01011A1H06 70 2e-11
BF01025A1D01 68 8e-11
>BF14_2773_C1
Length = 1257
Score = 476 bits (240), Expect = e-133
Identities = 243/244 (99%)
Strand = Plus / Minus
Query: 2506 tcgtaagtcttaaaatacgtttattgttcaattaaactaaattaaaatgagtataaggta 2565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1235 tcgtaagtcttaaaatacgtttattgttcaattaaactaaattaaaatgagtataaggta 1176
Query: 2566 agacttaaatctagaaggtattgagcggcggcaggtccgcctcggtgtcctcgaagctgt 2625
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1175 agacttaaatctagaaggtattgagcggcggcaggtccgcctcggtgtcctcgaaactgt 1116
Query: 2626 taggaggcagctcggccttgacgtgtctcgagtagtcgtacgtgaacagtttggtggcta 2685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 taggaggcagctcggccttgacgtgtctcgagtagtcgtacgtgaacagtttggtggcta 1056
Query: 2686 tgaacccgccggagccgcgggccccgcggtggatgatgcccgcgccgctcaacaaggccg 2745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 tgaacccgccggagccgcgggccccgcggtggatgatgcccgcgccgctcaacaaggccg 996
Query: 2746 agcc 2749
||||
Sbjct: 995 agcc 992
>BF01012A1B09
Length = 841
Score = 123 bits (62), Expect = 2e-27
Identities = 83/90 (92%)
Strand = Plus / Minus
Query: 2326 tcacggttgctgaaaagtaaccgaaacgtcgggattatgtagtttcaaaataataaaatc 2385
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 833 tcacggctgctgaaaagtaaccgaaacgtcgggattatgtagttttaaaataataaaatc 774
Query: 2386 cgcttagtatatccaaaatacatttgtttc 2415
||| |||| ||||| ||||| ||| |||||
Sbjct: 773 cgcgtagtgtatccgaaatatattagtttc 744
>BF14_729_C3
Length = 2041
Score = 115 bits (58), Expect = 4e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 2326 tcacggttgctgaaaagtaaccgaaacgtcgggattatgtagtttcaaaataataaaatc 2385
|||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1604 tcacggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaataataaaatc 1663
Query: 2386 cgcttagtatatcc 2399
||| ||||||||||
Sbjct: 1664 cgcgtagtatatcc 1677
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 2247 acggtgtctcgaggttctgcggtgtagtcgcggacatgggattttatatttttaag 2302
||||||||| ||||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 1489 acggtgtcttgaggtcctgcggtgtggtttcggacatgggattttatatttttaag 1434
>BF01024A1H07
Length = 726
Score = 99.6 bits (50), Expect = 2e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 2326 tcacggttgctgaaaagtaaccgaaacgtcgggattatgtagtttcaaaataataaaatc 2385
|||||||||||||||||||||||||||||| | ||||||||| || ||||||||||||||
Sbjct: 663 tcacggttgctgaaaagtaaccgaaacgtcngnattatgtagntttaaaataataaaatc 722
Query: 2386 cgc 2388
|||
Sbjct: 723 cgc 725
>BF01019B1G10
Length = 488
Score = 83.8 bits (42), Expect = 1e-15
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 2326 tcacggttgctgaaaagtaaccgaaacgtcgggattatgtag-tttcaaaataataaaat 2384
|||||||| |||||||| |||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 387 tcacggttactgaaaaggaaccgaaacgtcgggattatgtagtttttaaaataataaaat 328
Query: 2385 ccgcttagta 2394
||| |||||
Sbjct: 327 tcgcgtagta 318
>BF14_729_C2
Length = 1289
Score = 81.8 bits (41), Expect = 5e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 2326 tcacggttgctgaaaagtaaccgaaacgtcgggattatgtagttt 2370
|||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 544 tcacggttgctgaaaagtaaccgaaacgtcgggagtatgtagttt 588
>BF01056A1B08
Length = 761
Score = 73.8 bits (37), Expect = 1e-12
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 2327 cacggttgctgaaaagtaaccgaaacgtcgggattatgtagtttcaaaataataaaa 2383
||||||| |||||||| |||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 224 cacggttcctgaaaagcaaccgaaacgtcgggattgtgttgttttaaaataataaaa 168
>BF01011A1H06
Length = 739
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 2326 tcacggttgctgaaaagtaaccgaaacgtcgggattatgtagt 2368
|||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 476 tcacggttactgaaaagtaaccgaaacgtcgggagtatgtagt 518
>BF01025A1D01
Length = 764
Score = 67.9 bits (34), Expect = 8e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 2326 tcacggttgctgaaaagtaaccgaaacgtcggga 2359
||||||||||||||||||||||||||||||||||
Sbjct: 468 tcacggttgctgaaaagtaaccgaaacgtcggga 435
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 252,509
Number of extensions: 4921
Number of successful extensions: 4921
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 4920
Number of HSP's successfully gapped: 10
Length of query: 2773
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2756
Effective length of database: 8,119,229
Effective search space: 22376595124
Effective search space used: 22376595124
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)