BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06658 (UTR included)
(4894 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033B2C08 1560 0.0
>BF01033B2C08
Length = 820
Score = 1560 bits (787), Expect = 0.0
Identities = 793/795 (99%)
Strand = Plus / Plus
Query: 1607 ggcgggcccggggtctcacaagacggcctcgctccaggccggggccggcaccgcgctcgc 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 ggcgggcccggggtctcacaagacggcctcgctccaggccggggccggcaccgcgctcgc 84
Query: 1667 cgtgccacagtccacacagatgatgcgcggccggtccgcgtccgacgaccagtcctcgga 1726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 cgtgccacagtccacacagatgatgcgcggccggtccgcgtccgacgaccagtcctcgga 144
Query: 1727 cgccggaggagacacgccggagataagagcgctggagccgctgtaccctcagacggcggg 1786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 cgccggaggagacacgccggagataagagcgctggagccgctgtaccctcagacggcggg 204
Query: 1787 cggcagcacggctctggcgctgccctcgctccccgccctgcacgacgtgaacatgggaga 1846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cggcagcacggctctggcgctgccctcgctccccgccctgcacgacgtgaacatgggaga 264
Query: 1847 cgcgctggctctcaccacacatgcccacgaagacatcgaccccgatgtagacgtgcagta 1906
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 265 cgcgctggctctcaccacacatgcccacgatgacatcgaccccgatgtagacgtgcagta 324
Query: 1907 cgagctggaggcagcagcgtggcaagacacgaggccggccctgcccgcgccgccctcgcc 1966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgagctggaggcagcagcgtggcaagacacgaggccggccctgcccgcgccgccctcgcc 384
Query: 1967 catggtcagcacgccgccctccactgacacgcagctccagctgcacactcctaccgacga 2026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catggtcagcacgccgccctccactgacacgcagctccagctgcacactcctaccgacga 444
Query: 2027 gcagatccccgtcaacgagtccatcatatccctgctgctgaagcttcactcgcagctgtc 2086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcagatccccgtcaacgagtccatcatatccctgctgctgaagcttcactcgcagctgtc 504
Query: 2087 ggggcgactcgactccttctcgctggaggagccggctatagcctgcgacgaacctatcgg 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggggcgactcgactccttctcgctggaggagccggctatagcctgcgacgaacctatcgg 564
Query: 2147 tgacgggccccacttcatcggtctcctggtgcacaagctggccgccctggacgcgcggtg 2206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgacgggccccacttcatcggtctcctggtgcacaagctggccgccctggacgcgcggtg 624
Query: 2207 tgccgccgccgtgcagcaagtgaggcgcgcgctctggccccatcagagagagagacaggc 2266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgccgccgccgtgcagcaagtgaggcgcgcgctctggccccatcagagagagagacaggc 684
Query: 2267 ggagcagagagcgagggagaggagggaaaaggaagagcgctccaggagggccagggacag 2326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggagcagagagcgagggagaggagggaaaaggaagagcgctccaggagggccagggacag 744
Query: 2327 gcagcagcagctcatgagggagttcgccaggagacaacagcagtttatgtcggcgatgga 2386
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 745 gcagcagcagctcatgagggagttcgccaggagacaacagcagtttatgtctgcgatgga 804
Query: 2387 gagcatggagggcgc 2401
|||||||||||||||
Sbjct: 805 gagcatggagggcgc 819
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 367,670
Number of extensions: 7771
Number of successful extensions: 7771
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7771
Number of HSP's successfully gapped: 1
Length of query: 4894
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4876
Effective length of database: 8,109,745
Effective search space: 39543116620
Effective search space used: 39543116620
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)