BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06678 (UTR included)
(1675 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B2H03 420 e-117
>BF01037B2H03
Length = 830
Score = 420 bits (212), Expect = e-117
Identities = 266/284 (93%)
Strand = Plus / Minus
Query: 822 tggtccatggtgcttttttctgatgagtctcattttagatttcatccggattcacgaaaa 881
|||||||||||| ||||||| |||||||||| ||| |||||||||| |||||||||| |
Sbjct: 284 tggtccatggtgtttttttcagatgagtctcggtttggatttcatccagattcacgaaga 225
Query: 882 ttaagggtttggcgacttcctggtagacgaagccgtctccagcatccacaagaagtccat 941
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 224 ctaagggtttggcgagttcctggtagacgaagccgtctccagcatccacaagaagcccat 165
Query: 942 tcatatcaaggaggcactattatggtatgtgctggtattcgtatcggtgcgcgaaccgat 1001
||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 164 tcatatcaaggcagcattattatggtatgggctggtattcgtatcggtgcgcgaaccgat 105
Query: 1002 ctcatttggataagagggaacatgaatgcactgaaataccgcaatgaggtagtggaacct 1061
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 104 ctgatttggataagagggaacataaatgcactgaaataccgcaatgaggtagtggaacct 45
Query: 1062 gtgattatcccacacaggttacaaatgggtcaagagttccaact 1105
|||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 44 gtgattatcccacacagggtacaaatgggtcaggagttccaact 1
Score = 143 bits (72), Expect = 1e-33
Identities = 160/187 (85%), Gaps = 8/187 (4%)
Strand = Plus / Minus
Query: 354 tacacatcaacattgtctagtgatattacacgaaagacttcttaacttgaaaactattta 413
|||||||||||| ||||||| |||||||| |||||| |||||||||| |||||| ||||
Sbjct: 530 tacacatcaacaatgtctagggatattacgtgaaagatttcttaacttaaaaacttttta 471
Query: 414 ctgtata-aaaaaagtttgtatataaaatatattcttctccactacttctttccaaatt- 471
| |||| |||||||||| |||||||||||| || |||||||| |||||||||||||||
Sbjct: 470 atatatacaaaaaagtttatatataaaatattttattctccac-acttctttccaaattc 412
Query: 472 -----aaaaaaaaaactcattttgaaacaaaagaatgtcgattattcgcatttggccgtc 526
|| ||||||| ||||||| |||||||||||||||| | | ||| |||||||||||
Sbjct: 411 aaaaaaataaaaaaaatcattttaaaacaaaagaatgtcggtaactcgaatttggccgtc 352
Query: 527 gaaaagt 533
|||||||
Sbjct: 351 gaaaagt 345
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 283,833
Number of extensions: 6967
Number of successful extensions: 6967
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6965
Number of HSP's successfully gapped: 3
Length of query: 1675
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1658
Effective length of database: 8,119,229
Effective search space: 13461681682
Effective search space used: 13461681682
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)