BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06682 (UTR included)
(4360 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01046A2G06 1138 0.0
>BF01046A2G06
Length = 813
Score = 1138 bits (574), Expect = 0.0
Identities = 639/659 (96%), Gaps = 5/659 (0%)
Strand = Plus / Plus
Query: 3704 gcggccggcggtcggcgcgcgggcgcttcggttcgctcacatctccaactggatagagca 3763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcggccggcggtcggcgcgcgggcgcttcggttcgctcacatctccaactggatagagca 60
Query: 3764 gaagctcaccaaggagttcgagaaggtcctcgtgctgcccaacatggaggacttcatcat 3823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaagctcaccaaggagttcgagaaggtcctcgtgctgcccaacatggaggacttcatcat 120
Query: 3824 agacgtcatgtcacccacgcctatagagttcgagtaggacatcagcgtaccaataccgga 3883
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agacgtcatgtcacccacgcccatagagttcgagtaggacatcagcgtaccaataccgga 180
Query: 3884 tttacatatgtacatcggggcttgacgtggactcgcactgatttagcatttcctgttcat 3943
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 tttacatatgtacatcggggcttgacatggactcgcactgatttagcatttcctgttcat 240
Query: 3944 cttacatgtatatccgcagattaaaaaaatattgcgtggagtccctacgcgttgaagaag 4003
||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 241 cttccatgtatatccgcagattaaaaaaatattgcgtggcgtccctgcgcgttgaagaag 300
Query: 4004 tgaagcttcgtgatgtataaatgaaagtaggaaggggtggaaatcacttttggtgaactc 4063
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 301 cgaagcttcgtcatgtataaatgaa---aggaaggggtggaaatcacttttggtgaactc 357
Query: 4064 ttattgttcctttaagacaaactttataaacgttgcttacaactcacacttgagctaccc 4123
|||||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||
Sbjct: 358 atattgttcctataagacaaactttatgaacgttgcttacaactcacaattgagccaccc 417
Query: 4124 gttcactctcgctccg--tctctctatccccctccacggagcgttgaacgtttaacgcaa 4181
| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 418 gctcactctcgctccgtctctctctatccccctccccggagcgttgaacgtttaacgcaa 477
Query: 4182 cctcgttgcaactggcataaggagatccacttcaaaaattaagaattatactctccgttt 4241
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 478 cctcgttgcaactggcataaggagatccacttcaaaaatgaagaattatactctccgttt 537
Query: 4242 gtagtgtgacggtttaaacttgtggtaagagctgattaaactatagacaactgttctata 4301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gtagtgtgacggtttaaacttgtggtaagagctgattaaactatagacaactgttctata 597
Query: 4302 acacaaacaatatgagctcgttacggagacgagctgtcaccgagcgtgtcacacgtgac 4360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 acacaaacaatatgagctcgttacggagacgagctgtcaccgagcgtgtcacacgtgac 656
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 388,715
Number of extensions: 6772
Number of successful extensions: 6772
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6770
Number of HSP's successfully gapped: 1
Length of query: 4360
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4342
Effective length of database: 8,109,745
Effective search space: 35212512790
Effective search space used: 35212512790
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)