BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06703 (UTR included)
(1615 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3452_C1 1267 0.0
>BF14_3452_C1
Length = 1012
Score = 1267 bits (639), Expect = 0.0
Identities = 642/643 (99%)
Strand = Plus / Plus
Query: 520 aggccattgtcatcgatggccgcggccatctgctcggccgcctggccgcagtcatcgcta 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aggccattgtcatcgatggccgcggccatctgctcggccgcctggccgcagtcatcgcta 411
Query: 580 aggtcctcttggaaggaaataaagtggttgtcgtgaggtgtgaacaactcaacatctcag 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aggtcctcttggaaggaaataaagtggttgtcgtgaggtgtgaacaactcaacatctcag 471
Query: 640 gaaacttcttcaggaacaagctgaagtttatgtcatttttacgcaaacgctgcaatgtca 699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gaaacttcttcaggaacaagctgaagtttatgtcatttttacgcaaacgctgcaatgtca 531
Query: 700 atccagcccgtgggccattccacttcagagcaccttctaaggttctgtggaaaacagtgc 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 atccagcccgtgggccattccacttcagagcaccttctaaggttctgtggaaaacagtgc 591
Query: 760 gaggtatgatccctcacaagactgagcgcggtaaggacgcgttgagacggttacgtgcgt 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gaggtatgatccctcacaagactgagcgcggtaaggacgcgttgagacggttacgtgcgt 651
Query: 820 acgatggttgcccaccaccatacgacaaccgtcgtcgtgttgtcgtgccagcggcgttac 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 acgatggttgcccaccaccatacgacaaccgtcgtcgtgttgtcgtgccagcggcgttac 711
Query: 880 gtgtgttctgtctgagacctggacgcaagtactgtcatgttggtcgtttgtctcacgaag 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gtgtgttctgtctgagacctggacgcaagtactgtcatgttggtcgtttgtctcacgaag 771
Query: 940 ttggatggaagtaccgtgatgttgtccgtaagctggaagacaagagaaagttcaagacca 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ttggatggaagtaccgtgatgttgtccgtaagctggaagacaagagaaagttcaagacca 831
Query: 1000 tacataaagtagcttatgagaataaactcaagaaaatcaccaaggaggctggtgagaagg 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 tacataaagtagcttatgagaataaactcaagaaaatcaccaaggaggctggtgagaagg 891
Query: 1060 ttgcaaaaacaaccgcaccattcaccgccatcatgcaatcctatggatacaattaggact 1119
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 ttgcaaaaacaactgcaccattcaccgccatcatgcaatcctatggatacaattaggact 951
Query: 1120 aagagaattatataaaaaaaataaacctctggttgcccaaaaa 1162
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 aagagaattatataaaaaaaataaacctctggttgcccaaaaa 994
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 302,815
Number of extensions: 13365
Number of successful extensions: 13365
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13365
Number of HSP's successfully gapped: 1
Length of query: 1615
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1598
Effective length of database: 8,119,229
Effective search space: 12974527942
Effective search space used: 12974527942
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)