BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06731 (UTR included)
(1212 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B1C07 664 0.0
BF01039A2D08 396 e-110
BF01033A1A02 248 2e-65
>BF01054B1C07
Length = 790
Score = 664 bits (335), Expect = 0.0
Identities = 368/379 (97%)
Strand = Plus / Plus
Query: 830 gtcaaaagtaacttcggctatttttattttcattgctttatttattacttatgtatttta 889
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 77 gtcaaaagtaacttcggctatttttatttccattgctttatttattatttatgtatttta 136
Query: 890 tataagtaaaacaatacatataaattcgtctaatctttctttctaaagactctctccaat 949
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tgtaagtaaaacaatacatataaattcgtctaatctttctttctaaagactctctccaat 196
Query: 950 tgggggactaaaagatctctaaagtacgagcactagtgggtttgagaagagcccttcata 1009
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 197 tgtgggactaaaagatctctaaagtaccagcactagtgggtttgagaagagcccttcata 256
Query: 1010 gaccgcttaatcttcgaaattaggacgagaaaaattgtttgtttcttaatggtatttcaa 1069
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 257 gaccgcttaatcttcgaaattaggacgagaaaaattttttgtttcttaatggtatttcaa 316
Query: 1070 taacagtgatgacattaagtgtttcaaaatcaacaattaacgtatgtgacggattatgtc 1129
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 317 taacagtgatgacattaagtgtttcaaaatcaacaattaacgtatgtgacgaatcatgtc 376
Query: 1130 aaataactatgttgataattttgattcatttaattgatagcaataaatttaattattgaa 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 377 aaataactatgttgataattttgattcatttaattgatagcaataaatttaattacctaa 436
Query: 1190 aaaaaaattactgataaat 1208
|||||||||||||||||||
Sbjct: 437 aaaaaaattactgataaat 455
>BF01039A2D08
Length = 805
Score = 396 bits (200), Expect = e-110
Identities = 206/208 (99%)
Strand = Plus / Plus
Query: 537 aataaaatcaagaagaagtatgggtcattgggtgacagcgtggtggtcgtcaaattggag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aataaaatcaagaagaagtatgggtcattgggtgacagcgtggtggtcgtcaaattggag 570
Query: 597 aggaccccgaaggctggactagggctcagtctggccggtcacagggacaggagccgcatg 656
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 571 aggaccccgaaggctggactagggctcagtctggccggtcatagggacaggagccgcatg 630
Query: 657 gccgtgttcatatgcggcttaaacccagccggcgcggcggctaagtcctcgccgcctatt 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gccgtgttcatatgcggcttaaacccagccggcgcggcggctaagtcctcgccgcctatt 690
Query: 717 aaagttggcgacgagatactggaggtga 744
||||| ||||||||||||||||||||||
Sbjct: 691 aaagtcggcgacgagatactggaggtga 718
>BF01033A1A02
Length = 779
Score = 248 bits (125), Expect = 2e-65
Identities = 134/138 (97%)
Strand = Plus / Plus
Query: 537 aataaaatcaagaagaagtatgggtcattgggtgacagcgtggtggtcgtcaaattggag 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aataaaatcaagaagaagtatgggtcattgggtgacagcgtggtggtcgtcaaattggag 701
Query: 597 aggaccccgaaggctggactagggctcagtctggccggtcacagggacaggagccgcatg 656
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aggaccccgannnctggacttgggctcagtctggccggtcacagggacaggagccgcatg 761
Query: 657 gccgtgttcatatgcggc 674
||||||||||||||||||
Sbjct: 762 gccgtgttcatatgcggc 779
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 217,487
Number of extensions: 5593
Number of successful extensions: 5593
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5593
Number of HSP's successfully gapped: 3
Length of query: 1212
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1195
Effective length of database: 8,119,229
Effective search space: 9702478655
Effective search space used: 9702478655
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)