BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06779 (UTR included)
(1591 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 256 9e-68
BF01060B1D11 210 5e-54
BF14_335_C2 105 2e-22
>BF01047B2H03
Length = 758
Score = 256 bits (129), Expect = 9e-68
Identities = 235/267 (88%), Gaps = 5/267 (1%)
Strand = Plus / Minus
Query: 304 ttacatcgctcccaaaagacaaagatgccccagagctagagtcaaggcttcaattccaca 363
||||||| ||| ||||| | | ||||||||| || ||| ||||||| ||||||||||| |
Sbjct: 672 ttacatcactctcaaaaaatagagatgcccctgaactaaagtcaagacttcaattccata 613
Query: 364 agcagtttatgataggagcgtaaagtaac-agagcagggttaggatcaagtaagaaggtc 422
| ||||||||||||||||| |||||||| |||| ||| ||||||||||| ||||||| |
Sbjct: 612 aacagtttatgataggagcacaaagtaacgagagtaggattaggatcaaggaagaaggcc 553
Query: 423 caagatacggatatattgaagtcttttattcggcaagacgagaatgataaatataagatc 482
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 552 caagatacggatatattgaagtcttttattcggcaagacgagaatgatggatataacatc 493
Query: 483 catgcaataagtttagaaatgcagaacgaatggttagacatag-gagatttttgcatccc 541
|||||||| |||||||| ||||||||||| ||||||||||||| |||| || ||| ||
Sbjct: 492 catgcaatgagtttagatatgcagaacgagtggttagacatagagaga---ttccattcc 436
Query: 542 attagcacaaaaatggcgcaccttaat 568
||||||| ||||||||||||||||||
Sbjct: 435 attagcaataaaatggcgcaccttaat 409
Score = 155 bits (78), Expect = 3e-37
Identities = 176/206 (85%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 803 aatagccacaaacgagcgatcagtaggttttgtgagagagggcactagggctataaaatc 862
|||| ||||||||| ||||| | | |||||||||||||| | || |||||||||||| ||
Sbjct: 205 aataaccacaaacgggcgattaattggttttgtgagagaagacattagggctataaagtc 146
Query: 863 aaatgtcaagccttactccatccttaaagcggctttggattgcactataatgatagatac 922
||| ||||||||||||| ||||||||||||| || ||||||||||||||| || |||||
Sbjct: 145 aaacatcaagccttactctatccttaaagcggtttcggattgcactataatcatggatac 86
Query: 923 gtatgaaaaacaatacaaaatctccgagaatatttgtgcgccggcctccagaccagacat 982
||||| ||| |||||||||| ||||| ||| ||||| | ||| ||||||||||||||
Sbjct: 85 gtatggggaacgatacaaaatccccgagcata-ttgtgtgtcggtttccagaccagacat 27
Query: 983 a-tttatgtattcgagaattttaaag 1007
| ||||| |||||| |||||||||||
Sbjct: 26 attttatatattcgcgaattttaaag 1
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 246 gatgagtctaaaaaggccatgggagctctataaacacctgagagtttccaagaga 300
|||||||||||||||||||| |||||||||||||||| | |||||||||||||||
Sbjct: 758 gatgagtctaaaaaggccatcggagctctataaacacttaagagtttccaagaga 704
>BF01060B1D11
Length = 799
Score = 210 bits (106), Expect = 5e-54
Identities = 194/220 (88%), Gaps = 5/220 (2%)
Strand = Plus / Minus
Query: 351 cttcaattccacaagcagtttatgataggagcgtaaagtaac-agagcagggttaggatc 409
|||||||||||||| ||||||||||||||||| |||||||| |||| ||| ||||||||
Sbjct: 453 cttcaattccacaaacagtttatgataggagcacaaagtaacgagagtaggattaggatc 394
Query: 410 aagtaagaaggtccaagatacggatatattgaagtcttttattcggcaagacgagaatga 469
||| ||||||| ||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 393 aaggaagaaggctcaagatatggatatattgaagtattttattcagcaagacgagaatga 334
Query: 470 taaatataagatccatgcaataagtttagaaatgcagaacgaatggttagacatag-gag 528
| |||||||||||||||||| ||||||| ||||||||||| ||||||||||||| |||
Sbjct: 333 tggatataagatccatgcaatgcgtttagagatgcagaacgagtggttagacatagagag 274
Query: 529 atttttgcatcccattagcacaaaaatggcgcaccttaat 568
| || ||| ||||||||| ||||||||||||||||||
Sbjct: 273 a---ttccattccattagcaataaaatggcgcaccttaat 237
Score = 145 bits (73), Expect = 2e-34
Identities = 122/137 (89%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 164 tcataaagatgttgaagttgtggctcggactcgcgctaacggctgattcatcggctttat 223
|||||||| ||||||| ||||||||| | |||||| | || ||||| | |||||||||
Sbjct: 668 tcataaag-tgttgaatttgtggctccggctcgcgacatcgactgatacgtcggctttaa 610
Query: 224 ttagggatcgcaaaagttttgggatgagtctaaaaaggccatgggagctctataaacacc 283
||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 609 ttagggatcgcaatagttttgggatgagtctaaaaaggccatcggagctctataaacact 550
Query: 284 tgagagtttccaagaga 300
| |||||||||||||||
Sbjct: 549 taagagtttccaagaga 533
>BF14_335_C2
Length = 1827
Score = 105 bits (53), Expect = 2e-22
Identities = 105/121 (86%), Gaps = 1/121 (0%)
Strand = Plus / Minus
Query: 979 acatatttatgtattcgagaattttaaagcgcgttgtaatgatagagcttacggtttcct 1038
|||||||| |||||||| ||||||||||||||| | | ||||||| ||||||| |||
Sbjct: 1277 acatatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggtt-cct 1219
Query: 1039 tgggaaaccaacatccccaaataccataccatcaaggtcaacaaatattatgagctaact 1098
||| | ||||||||||||||| ||||| |||||||||||||||| ||||||||||| |||
Sbjct: 1218 tggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcact 1159
Query: 1099 a 1099
|
Sbjct: 1158 a 1158
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 174,418
Number of extensions: 8907
Number of successful extensions: 8907
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 8901
Number of HSP's successfully gapped: 6
Length of query: 1591
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1574
Effective length of database: 8,119,229
Effective search space: 12779666446
Effective search space used: 12779666446
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)