BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06783 (UTR included)
(1663 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B2A05 632 0.0
>BF01016B2A05
Length = 630
Score = 632 bits (319), Expect = 0.0
Identities = 346/355 (97%)
Strand = Plus / Minus
Query: 1309 actcgtatccaaactctaaatacatggttaacctgcggctttgcccacatattatcatta 1368
||||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||| |
Sbjct: 604 actcggatccaaactctaaatacatagctaacctgcggctttgcccacttattatcataa 545
Query: 1369 taaaatatgtccataatagttgacatattaaatttataatatgagatcttctttattaag 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 taaaatatgtccataatagttgacatattaaatttataatatgagatcttctttattaag 485
Query: 1429 tgtgatttgattttctaaaacgccttaattatatcttgactataacgtttaataacaaat 1488
||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 484 tgtcatttgtttttctaaaacgccttaactatatcttgactataacgtttaataacaaat 425
Query: 1489 aaatgattgaaggtgttagcaattgttatgactatattattattaataatatgtgactgg 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aaatgattgaaggtgttagcaattgttatgactatattattattaataatatgtgactgg 365
Query: 1549 caataaattttcttcagtcgtaatatccacaaacgtgatgcctataaaccggccgatctt 1608
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 364 caataaattttcttcagtcgtaatatccacaaacatgatgcctataaaccggccgatctt 305
Query: 1609 gaagtactgcacttcactattgtaaagaaacagctatggtctccagctttgaatg 1663
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gaagtactgcacttcactattgtaaagaaacagctatggtctccagctttgaatg 250
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 255,392
Number of extensions: 5854
Number of successful extensions: 5854
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5854
Number of HSP's successfully gapped: 1
Length of query: 1663
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1646
Effective length of database: 8,119,229
Effective search space: 13364250934
Effective search space used: 13364250934
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)