BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06789 (UTR included)
(1516 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B1A11 131 4e-30
BF01030A2C06 121 3e-27
BF01056B1D01 115 2e-25
BF01018B2A11 98 5e-20
>BF01016B1A11
Length = 786
Score = 131 bits (66), Expect = 4e-30
Identities = 93/102 (91%)
Strand = Plus / Plus
Query: 432 aaaaaatataaagtagcctgtttaattttgagaatgattaaacttgtattatgataactt 491
|||||||||||| |||||| ||||||||||||||| | ||||||| ||| ||||||||||
Sbjct: 65 aaaaaatataaaatagcctatttaattttgagaattactaaacttatataatgataactt 124
Query: 492 tcaaatggtatgcccgatttaaatgatttaaaaagcaattta 533
|||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 125 tcaaatggtacgcctgatttaaatgatttaaaaagtaattta 166
>BF01030A2C06
Length = 599
Score = 121 bits (61), Expect = 3e-27
Identities = 102/115 (88%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 433 aaaaatataaagtagcctgtttaattttgagaatgatta---aacttgtattatgataac 489
||||||||||| |||||| |||||||||||| || |||| ||||| ||||||||||||
Sbjct: 1 aaaaatataaaatagcctttttaattttgaggattattattaaacttatattatgataac 60
Query: 490 tttcaaatggtatgcccgatttaaatgatttaaaaagcaatttacagatactgat 544
|| ||||||||| ||| |||||||||||||||||||| |||||||||||| ||||
Sbjct: 61 ttgcaaatggtacgcctgatttaaatgatttaaaaagtaatttacagatagtgat 115
>BF01056B1D01
Length = 838
Score = 115 bits (58), Expect = 2e-25
Identities = 102/116 (87%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 432 aaaaaatataaagtagcctgtttaattttgagaatgattaa---acttgtattatgataa 488
|||||||||||| |||||| ||||||||||||||| |||| |||| |||||||||||
Sbjct: 318 aaaaaatataaaatagcctttttaattttgagaattattattagacttatattatgataa 377
Query: 489 ctttcaaatggtatgcccgatttaaatgatttaaaaagcaatttacagatactgat 544
||| ||||||||| ||| || ||||||||||||||||| |||||||||||| ||||
Sbjct: 378 cttgcaaatggtacgcctgacttaaatgatttaaaaagtaatttacagatagtgat 433
>BF01018B2A11
Length = 733
Score = 97.6 bits (49), Expect = 5e-20
Identities = 85/97 (87%)
Strand = Plus / Plus
Query: 437 atataaagtagcctgtttaattttgagaatgattaaacttgtattatgataactttcaaa 496
||||||| | |||| |||||||||||| || ||||| || |||||||||| ||||||||
Sbjct: 414 atataaaatggcctatttaattttgagcatttttaaatttatattatgatacctttcaaa 473
Query: 497 tggtatgcccgatttaaatgatttaaaaagcaattta 533
|||| |||||||||||||||||||||||| ||||||
Sbjct: 474 cggtacgcccgatttaaatgatttaaaaagtaattta 510
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 233,659
Number of extensions: 5796
Number of successful extensions: 5796
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 5794
Number of HSP's successfully gapped: 4
Length of query: 1516
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1499
Effective length of database: 8,119,229
Effective search space: 12170724271
Effective search space used: 12170724271
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)