BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06801 (UTR included)
(3850 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054B2A08 797 0.0
BF14_335_C4 129 4e-29
BF01019A1H08 115 5e-25
BF01020A2A07 113 2e-24
BF14_335_C2 96 5e-19
BF01014B2F02 88 1e-16
BF01056B2D01 84 2e-15
BF01044B1A07 76 5e-13
BF01049B1F01 70 3e-11
>BF01054B2A08
Length = 729
Score = 797 bits (402), Expect = 0.0
Identities = 408/410 (99%)
Strand = Plus / Plus
Query: 1873 agacggagttacgtttcgatcgaaatggagaaaattgcgaacaagaaaatattaacgaaa 1932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agacggagttacgtttcgatcgaaatggagaaaattgcgaacaagaaaatattaacgaaa 379
Query: 1933 ctggtctgccgggcatacagagcactgtgcccaattcatattgcaatccaatgttacagg 1992
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctggtctgccaggcatacagagcactgtgcccaattcatattgcaatccaatgttacagg 439
Query: 1993 ttttatattacataccgccgttaaaagccacattattggctcacacttgcgccaaggagt 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttttatattacataccgccgttaaaagccacattattggctcacacttgcgccaaggagt 499
Query: 2053 tctgtctcagctgcgaattaggttttctattccgtgccctggactcgtccgggggcgccg 2112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctgtctcagctgcgaattaggttttctattccgtgccctggactcgtccgggggcgccg 559
Query: 2113 cgtgtcgcgctactaacttcctccgagcgttcagaacggtgccggaggctgcggcgctcg 2172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cgtgtcgcgctactaacttcctccgagcgttcagaacggtgccggaggctgcggcgctcg 619
Query: 2173 gactcatcctgcctgaacgcaccacgcccaggatagatgtcgccaccctcgttcagagtt 2232
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 620 gactcatcctgcctgaacgcaccacgcccaggatagatgtcgccactctcgttcagagtt 679
Query: 2233 ggaaccgtttcatcttacatcaaatgcacgcggagatactggaaacgcgg 2282
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggaaccgtttcatcttacatcaaatgcacgcggagatactggaaacgcgg 729
Score = 593 bits (299), Expect = e-169
Identities = 317/322 (98%), Gaps = 1/322 (0%)
Strand = Plus / Plus
Query: 1456 ctcccaacctgccgtacgccagttttgaagacaact-ctttctcgtactcgtcagttccg 1514
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 ctcccaacctgccgtacgccagttttgaagacaacnnctttctcgtactcgtcagttccg 60
Query: 1515 ctgccgccgctcgcctccggctccaaatggttcaatgaactgccacccgaattcttcacg 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgccgccgctcgcctccggctccaaatggttcaatgaactgccacccgaattcttcacg 120
Query: 1575 aacgtatacagaaagcctaagccgattgatcaagaagtattacgaacaatgaagatgcag 1634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacgtatacagaaagcctaagccgattgatcaagaagtattacgaacaatgaagatgcag 180
Query: 1635 ggtccgataggttacgcgcctaatccaaggacgcacagacgtaatcagatgccatacata 1694
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 ggtccgataggttacgcgcctaatccgaggacgcacagacgtaatcagatgccatacata 240
Query: 1695 gaagaagatttggaagacatcgaaaatccaggagtagatcgtcgtaacccgcagcaacca 1754
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 241 gaagaagatttgcaagacatcgaaaatcctggagtagatcgtcgtaacccgcagcaacca 300
Query: 1755 atacccagatattatttgaaga 1776
||||||||||||||||||||||
Sbjct: 301 atacccagatattatttgaaga 322
>BF14_335_C4
Length = 1491
Score = 129 bits (65), Expect = 4e-29
Identities = 93/101 (92%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 1775 gagacgaaacctctcagcattccatggatccaccgtgcgggtacgggt-ccatcgcgttg 1833
||||||||| ||||||||||||||||||| |||||||||| | |||| |||||||||||
Sbjct: 1364 gagacgaaaactctcagcattccatggattcaccgtgcggttgcggggaccatcgcgttg 1305
Query: 1834 caggggaagagcttcaacagtgcctgggacttgcgacccag 1874
|||| || |||||||||||||||||||||||||||||||||
Sbjct: 1304 caggagaggagcttcaacagtgcctgggacttgcgacccag 1264
>BF01019A1H08
Length = 504
Score = 115 bits (58), Expect = 5e-25
Identities = 93/102 (91%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 1775 gagacgaaacctctcagcattccatggatccaccgtgcgggtac-gggtccatcgcgttg 1833
|||| ||||||||| ||||||| |||||| |||||||||||| | |||||||||||||||
Sbjct: 364 gagatgaaacctcttagcattcaatggattcaccgtgcgggtgccgggtccatcgcgttg 423
Query: 1834 caggg-gaagagcttcaacagtgcctgggacttgcgacccag 1874
||||| || ||||||||||||||||||||| |||||||||||
Sbjct: 424 cagggagaggagcttcaacagtgcctgggagttgcgacccag 465
>BF01020A2A07
Length = 609
Score = 113 bits (57), Expect = 2e-24
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 3794 taatgaaagaatctagcgaagtggagtctaacgttacctaggtacataagccggatg 3850
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taatgaaagaatctagcgaagtggagtctaacgttacctaggtacataagccggatg 57
>BF14_335_C2
Length = 1827
Score = 95.6 bits (48), Expect = 5e-19
Identities = 89/100 (89%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 1773 aagagacgaaacctctcagcattccatggatccaccgtgcgggt-acgggtccatcgcgt 1831
|||||||||||||||| ||| ||| |||||| |||||||||||| ||||||| |||||
Sbjct: 806 aagagacgaaacctcttagctttctatggattcaccgtgcgggtgccgggtccgccgcgt 865
Query: 1832 tgcaggg-gaagagcttcaacagtgcctgggacttgcgac 1870
||||||| || ||||||||||||||||||||| |||||||
Sbjct: 866 tgcagggagaggagcttcaacagtgcctgggatttgcgac 905
>BF01014B2F02
Length = 623
Score = 87.7 bits (44), Expect = 1e-16
Identities = 91/103 (88%), Gaps = 4/103 (3%)
Strand = Plus / Plus
Query: 1774 agagacgaaacctctcagcattccatggatccaccgtgcgggt-acgggtccatcgcgtt 1832
||||||||||||||||||||||| ||||| |||||||||||| |||||||| |||||
Sbjct: 518 agagacgaaacctctcagcattcagtggatgcaccgtgcgggtgccgggtcca--gcgtt 575
Query: 1833 gcaggg-gaagagcttcaacagtgcctgggacttgcgacccag 1874
|||||| || |||||||| ||| |||| |||||||||||||||
Sbjct: 576 gcagggagaggagcttcagcagcgcctaggacttgcgacccag 618
>BF01056B2D01
Length = 728
Score = 83.8 bits (42), Expect = 2e-15
Identities = 80/90 (88%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1776 agacgaaacctctcagcattccatggatccaccgtgcgggt-acgggtccatcgcgttgc 1834
||||||||||||||| ||||||||| || |||||||||||| |||||||||| | ||||
Sbjct: 77 agacgaaacctctcaacattccatgaattcaccgtgcgggtgccgggtccatcacattgc 136
Query: 1835 aggg-gaagagcttcaacagtgcctgggac 1863
|||| || |||||||||||| |||||||||
Sbjct: 137 agggagaggagcttcaacagcgcctgggac 166
>BF01044B1A07
Length = 806
Score = 75.8 bits (38), Expect = 5e-13
Identities = 85/98 (86%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 1779 cgaaacctctcagcattccatggatccaccgtgcgggt-acgggtccatcgcgttgcagg 1837
|||||| ||||||| ||| |||||| |||||||||||| |||||||||||||| |||||
Sbjct: 431 cgaaacttctcagcgttcaatggattcaccgtgcgggtggcgggtccatcgcgtggcagg 490
Query: 1838 g-gaagagcttcaacagtgcctgggacttgcgacccag 1874
| || |||||||||| ||| |||||||| |||| ||||
Sbjct: 491 gagaggagcttcaactgtgtctgggactcgcgaaccag 528
>BF01049B1F01
Length = 840
Score = 69.9 bits (35), Expect = 3e-11
Identities = 45/47 (95%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 1829 cgttgcaggg-gaagagcttcaacagtgcctgggacttgcgacccag 1874
|||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 587 cgttgcagggagaggagcttcaacagtgcctgggacttgcgacccag 633
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 446,543
Number of extensions: 17517
Number of successful extensions: 17517
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 17508
Number of HSP's successfully gapped: 10
Length of query: 3850
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3832
Effective length of database: 8,109,745
Effective search space: 31076542840
Effective search space used: 31076542840
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)