BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06806 (UTR included)
(2209 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01010B2F09 434 e-121
BF14_917_C1 119 2e-26
>BF01010B2F09
Length = 764
Score = 434 bits (219), Expect = e-121
Identities = 240/246 (97%), Gaps = 2/246 (0%)
Strand = Plus / Plus
Query: 1877 ttatgtgaaaaatatttatattttaattgtatttacacagattatatagtttgctaacat 1936
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 ttatatgaaaaatatttatattttaattgtatttacacagattatatagtttgctaacat 83
Query: 1937 tcacgagaccctgcactgtgtcttaaatgcgaacatggaatatataactgtaaattaagt 1996
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tcacgagaccctgcactgt--cttaaatgcgaacatggaatatataactgtaaattaagt 141
Query: 1997 taatataaactaatttgaaaataaggtttatgttcatagttaaaggtatttttattcaag 2056
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 taatataaactaatttgataataaggtttatgttcatagttaaaggtatttttattcaag 201
Query: 2057 aagcagattacagatagttgttcatagaaagttatatgtatagtacgtgttttaatattc 2116
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 aaatagattacagatagttgttcatagaaagttatatgtatagtacgtgttttaatattc 261
Query: 2117 atcatc 2122
||||||
Sbjct: 262 atcatc 267
Score = 145 bits (73), Expect = 3e-34
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 2125 gtgagaggcgggcctttaacctccaggccactaagacttttaataaaattgtaaattaat 2184
||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 514 gtgagaggctggcctttaacctccagcccactaagacttttaatcaaattgtaaattaat 573
Query: 2185 atgtttattaaaatactatttattt 2209
|||||||||||||||||||||||||
Sbjct: 574 atgtttattaaaatactatttattt 598
>BF14_917_C1
Length = 1123
Score = 119 bits (60), Expect = 2e-26
Identities = 76/82 (92%)
Strand = Plus / Minus
Query: 2125 gtgagaggcgggcctttaacctccaggccactaagacttttaataaaattgtaaattaat 2184
||||||| | ||||||||| ||||| ||||||||||||||||| |||||||||||||||
Sbjct: 1118 gtgagagactggcctttaanntccagcccactaagacttttaatcaaattgtaaattaat 1059
Query: 2185 atgtttattaaaatactattta 2206
||||||||||||||||||||||
Sbjct: 1058 atgtttattaaaatactattta 1037
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,223
Number of extensions: 4049
Number of successful extensions: 4049
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4048
Number of HSP's successfully gapped: 3
Length of query: 2209
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2192
Effective length of database: 8,119,229
Effective search space: 17797349968
Effective search space used: 17797349968
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)