BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06809 (UTR included)
(2707 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3043_C1 1509 0.0
>BF14_3043_C1
Length = 840
Score = 1509 bits (761), Expect = 0.0
Identities = 817/837 (97%)
Strand = Plus / Plus
Query: 240 gcgataaagagtgtacatacatacctgataattttattactttcaatacaagtataaaca 299
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4 gcgataaagagtgtccatacatacctgataattttattactttcaatacgagtataaaca 63
Query: 300 attttcttgccgcaaatttggtcactgttatcagtaagtcaaacttaagtgggggtttca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 attttcttgccgcaaatttggtcactgttatcagtaagtcaaacttaagtgggggtttca 123
Query: 360 tgttagacgtttagagtgcacttacactttgcgttgtaatttttggtattaatttttaaa 419
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 124 tgttagacgtttagagtgcacttacactttgcgttgtaatttttcgtattaatttttaaa 183
Query: 420 atgttattagggcgactaacgagactttcattgccgtttttaaagcgctctttccacgta 479
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 184 atgttattagggcgactaacaagactttcattgccgtttttaaagcgctctttccacgta 243
Query: 480 tcaccaaaatcaaatcaagcaatggggatcgacgggaacaatatactcgctgaaagcttg 539
|||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||
Sbjct: 244 tcaccaaaatcaaatcaagcaatgggaatcgacggaaacaatattctcgctgaaagcttg 303
Query: 540 aagcgacaaggcattgaatatgtttttgggattgttggtattcctgtaatagagacttca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aagcgacaaggcattgaatatgtttttgggattgttggtattcctgtaatagagacttca 363
Query: 600 ttagcttttcaagctgcaggtctcaagtacattgggatgcgaaatgaacaggcagcctgt 659
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 364 ttagcttttcaagctgcaggtctcaaatacattgggatgcgaaatgaacaggcagcatgt 423
Query: 660 tatgctgctcaagctattggctatttaacaggtaaaccaggagtatgtctggttgtatct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tatgctgctcaagctattggctatttaacaggtaaaccaggagtatgtctggttgtatct 483
Query: 720 ggccctggtctcttacattgtattggaggtatggccaatgctcaagttaactgttggccg 779
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 484 ggccctggtctcttacattgtattggaggtatggccaatgctcaagtcaactgttggccg 543
Query: 780 ctgttagtcatagccggatcttgcccggaagaccatgaaggcattggcggtttccaggaa 839
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 544 ctgttagtcatagccggatcttgcccagaagaccacgaaggcattggcggtttccaggaa 603
Query: 840 tggctgcaggtggagtcatctcgtcagtatagtaaatatgcagcccgaccaccttcccca 899
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 604 tggctgcaggtggagtcatctcgtcagtatagtaaatatgcagcccggccaccttcccca 663
Query: 900 cgacttattccactacatgtagaaaaagcaatcagatatgccagctccggacgtccaggt 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 agacttattccactacatgtagaaaaagcaatcagatatgccagctccggacgtccaggt 723
Query: 960 gtcgcttatcttgatatgcctgctaccttattgacggctgaagctgatgaagataaggtt 1019
||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 724 gtcgcgtatcttgatatgcctgctaccttattgacggctgaagctgatgangatnnngtt 783
Query: 1020 cctttagactactactcagcggatccagttagtttggctcacccaaatccagtactg 1076
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 cctttggactactactcagcggatccagttagtttggctcacccaaatccagtactg 840
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 377,080
Number of extensions: 20898
Number of successful extensions: 20898
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20898
Number of HSP's successfully gapped: 1
Length of query: 2707
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2690
Effective length of database: 8,119,229
Effective search space: 21840726010
Effective search space used: 21840726010
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)