BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06815 (UTR included)
(1510 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_114_C1 1271 0.0
BF01055B2A04 80 1e-14
BF14_335_C2 78 5e-14
>BF14_114_C1
Length = 1760
Score = 1271 bits (641), Expect = 0.0
Identities = 657/661 (99%), Gaps = 1/661 (0%)
Strand = Plus / Minus
Query: 850 agattgctcagtgttcaaagatcctaacacccgatcctgatatgatgccagagggagaca 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1285 agattgctcagtgttcaaagatcctaacacccgatcctgatatgatgccagagggagaca 1226
Query: 910 gaagtagcgtggcgcgtgtgtgcgagcgagatggcaacacacgcccggacttaactacac 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 gaagtagcgtggcgcgtgtgtgcgagcgagatggcaacacacgcccggacttaactacac 1166
Query: 970 ttacgctagatggcgtcggaaacaaacatatagccacttagtacctaactgttagtaaaa 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 ttacgctagatggcgtcggaaacaaacatatagccacttagtacctaactgttagtaaaa 1106
Query: 1030 atcccttaacgcgttcaatatatatatatcatataagttatacagcagatcctacaagtt 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 atcccttaacgcgttcaatatatatatatcatataagttatacagcagatcctacaagtt 1046
Query: 1090 ctgtataagtgtatagtatagtacatctatattttttttcaaataactctgtgcctaata 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 ctgtataagtgtatagtatagtacatctatattttttttcaaataactctgtgcctaata 986
Query: 1150 tacatttaagccgatttactttgagaagctcgttaagggtagaagtggacatttcacagt 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 tacatttaagccgatttactttgagaagctcgttaagggtagaagtggacatttcacagt 926
Query: 1210 aacattacctacggagtgacgtcacgcagccgacggcagagaaaatatggcggagacaga 1269
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 925 aacattacctacggagtgacgtcacgcagacgacggcagagaaaatatggcggagacaga 866
Query: 1270 aaaaaaaccgaggaaatcacgaagcttacttataatatacaatacattgttatctcttaa 1329
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 aaaaaaa-cgaggaaatcacgaagcttacttataatatacaatacattgttatctcttaa 807
Query: 1330 actaacttaacagacacgctaccgttagatacatagatacaagtactcgggcaaacggtt 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 actaacttaacagacacgctaccgttagatacatagatacaagtactcgggcaaacggtt 747
Query: 1390 agtcgcaacaggtcgagctgggaacctttacgtataaatttgatatgattttatcttgag 1449
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 agtcgcaacagttggagctgggaacctttacgtataaatttgatatgattttatcttgag 687
Query: 1450 acttaactttagaaccccgcttgcgctttccgaatgtgaaccgtaacgaacatctcaatt 1509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 acttaactttagaaccccgcttgcgctttccgaatgtgaaccgtaacgaacatctcaatt 627
Query: 1510 c 1510
|
Sbjct: 626 c 626
>BF01055B2A04
Length = 830
Score = 79.8 bits (40), Expect = 1e-14
Identities = 81/94 (86%), Gaps = 3/94 (3%)
Strand = Plus / Minus
Query: 655 agcttacgattccttgggaaaacaacatccccaaagaccatgccatcaatgtcaacaagt 714
||||||||||||| ||| ||| ||||||||||||||||| ||||| | | ||||| |||
Sbjct: 537 agcttacgattccctggaaaaccaacatccccaaagaccgtgccaccgaggtcaataag- 479
Query: 715 gttacgagctcactaacgaactcagtaggaatag 748
||| |||||||||||||||||| |||||||||
Sbjct: 478 --tacaagctcactaacgaactcactaggaatag 447
>BF14_335_C2
Length = 1827
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 659 tacgattccttgggaaaacaacatccccaaagaccatgccatcaatgtcaacaagtgtta 718
|||| |||||||| | | ||||||||||||| ||||||||||||| |||||||||| |||
Sbjct: 1228 tacggttccttggaagaccaacatccccaaaaaccatgccatcaaggtcaacaagtatta 1169
Query: 719 cgagctcacta 729
||||||||||
Sbjct: 1168 tgagctcacta 1158
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 169,060
Number of extensions: 6779
Number of successful extensions: 6779
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6777
Number of HSP's successfully gapped: 3
Length of query: 1510
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1493
Effective length of database: 8,119,229
Effective search space: 12122008897
Effective search space used: 12122008897
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)