BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06861 (UTR included)
(3886 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005A1C05 1398 0.0
>BF01005A1C05
Length = 726
Score = 1398 bits (705), Expect = 0.0
Identities = 721/725 (99%), Gaps = 1/725 (0%)
Strand = Plus / Plus
Query: 2722 ccagtctcacggaaatggaaagaatggaagacacgagtttaggtataatagataagatag 2781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ccagtctcacggaaatggaaagaatggaagacacgagtttaggtataatagataagatag 62
Query: 2782 ggaaagagaaaatagattttagtaaaaactcagataacaaggaaggctcgaacgtgaccg 2841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ggaaagagaaaatagattttagtaaaaactcagataacaaggaaggctcgaacgtgaccg 122
Query: 2842 tctgggacatggagctggagactgtggcggacaaagcgaaggaagacgtcgacaaactaa 2901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tctgggacatggagctggagactgtggcggacaaagcgaaggaagacgtcgacaaactaa 182
Query: 2902 actctttacatttagatcttggcatgtctagcgacagtgaaaacgaatttatggaaggtc 2961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 actctttacatttagatcttggcatgtctagcgacagtgaaaacgaatttatggaaggtc 242
Query: 2962 ataaagtaaaggatcagctcccgaccgagaggatacagacggcgactcccactggtgagg 3021
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 243 ataaagtaaaggatcagctcccaaccgagaggatacagacggcgactcccactggtgagg 302
Query: 3022 gtccggagaggtttggaacgttgtcgcgggcgcgcacgttgcttagtcaattgcaagacg 3081
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 303 gtccggagaggtttggaacgttgtcgcgggcgcgcacgtt-cttagtcaattgcaagacg 361
Query: 3082 acggttcgtctagtaacgactcgtccttcgccataaagtccaagtgccggcgggaagagc 3141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 acggttcgtctagtaacgactcgtccttcgccataaagtccaagtgccggcgggaagagc 421
Query: 3142 gcgagtcggaagccctgtccaaagcgcgcgcgaagttgtccgagaaagtagcggaagcta 3201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gcgagtcggaagccctgtccaaagcgcgcgcgaagttgtccgagaaagtagcggaagcta 481
Query: 3202 aatcgcaacagaaaaggatagacgtgtatagcacggccatcagtacgacggatatcaatc 3261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aatcgcaacagaaaaggatagacgtgtatagcacggccatcagtacgacggatatcaatc 541
Query: 3262 tagattcgttttcgtatctagaagagggtctgctagaaggcgaggaggctcgagtcgagt 3321
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tagattcgttttcgtatctagaagagggtctgctagaaggcgaggaggctcgagtcgagc 601
Query: 3322 tgaccgagtccctgtcccgcctgctgagcgacggacacgcccctttacacaaaccgcatc 3381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgaccgagtccctgtcccgcctgctgagcgacggacacgcccctttacacaaaccgcatc 661
Query: 3382 agtagcgacgacttctgacgaatgtaacttcaccagtgctatttgtgagaacgctagacg 3441
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 662 agtagcgacgacttctgacgaatgtaacttcaccagtgctatttgtaagaacgctagacg 721
Query: 3442 cgatg 3446
|||||
Sbjct: 722 cgatg 726
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 468,503
Number of extensions: 25891
Number of successful extensions: 25891
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 25890
Number of HSP's successfully gapped: 1
Length of query: 3886
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3868
Effective length of database: 8,109,745
Effective search space: 31368493660
Effective search space used: 31368493660
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)