BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06870 (UTR included)
(1168 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 105 2e-22
BF01055B2A04 84 6e-16
BF01031B2E06 84 6e-16
BF14_335_C2 76 1e-13
>BF01047B2H03
Length = 758
Score = 105 bits (53), Expect = 2e-22
Identities = 114/133 (85%), Gaps = 1/133 (0%)
Strand = Plus / Minus
Query: 72 aaaaagcaataaccataaacgagcgatcaataggttttgtgagagaaggcactagggcta 131
|||||| |||||||| ||||| ||||| ||| |||||||||||||||| || ||||||||
Sbjct: 212 aaaaagaaataaccacaaacgggcgattaattggttttgtgagagaagacattagggcta 153
Query: 132 taaaattaaacatcaagccttactctctcctttaaaccggctccagattagactataatg 191
|||| | ||||||||||||||||||| ||| ||||| ||| | | |||| ||||||||
Sbjct: 152 taaagtcaaacatcaagccttactctatcc-ttaaagcggtttcggattgcactataatc 94
Query: 192 atggacacgtatg 204
||||| |||||||
Sbjct: 93 atggatacgtatg 81
>BF01055B2A04
Length = 830
Score = 83.8 bits (42), Expect = 6e-16
Identities = 101/120 (84%), Gaps = 3/120 (2%)
Strand = Plus / Minus
Query: 287 cgttgtgttaataaagcttgcgattccttgggaaaccaacatcctcaaagaccatgccat 346
|||||| |||||| ||||| ||||||| ||| |||||||||||| |||||||| |||||
Sbjct: 551 cgttgttttaatagagcttacgattccctggaaaaccaacatccccaaagaccgtgccac 492
Query: 347 caaggtcgataattattacgagttcactaacgaactcactaagaataggttcgttgtaaa 406
| ||||| ||| | ||| || |||||||||||||||||| |||||| ||||| |||||
Sbjct: 491 cgaggtc---aataagtacaagctcactaacgaactcactaggaatagattcgtcgtaaa 435
>BF01031B2E06
Length = 707
Score = 83.8 bits (42), Expect = 6e-16
Identities = 96/116 (82%), Gaps = 11/116 (9%)
Strand = Plus / Plus
Query: 318 gaaaccaacatcctcaaagaccatgccatcaaggtcgataattattacgagttcactaac 377
||||||||||||| ||||||||||||||||||| || |||| ||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacga---------- 485
Query: 378 gaactcactaagaataggttcgttgtaaatttggacgcggtagatgtgggagcgag 433
| |||||||||||||||||||| | ||||||| |||||||||| |||||||||||
Sbjct: 486 -agctcactaagaataggttcgtggcaaatttgtacgcggtagaagtgggagcgag 540
>BF14_335_C2
Length = 1827
Score = 75.8 bits (38), Expect = 1e-13
Identities = 98/118 (83%)
Strand = Plus / Minus
Query: 258 atatttttgttttcgcgaattttatagcgcgttgtgttaataaagcttgcgattccttgg 317
|||||| ||| ||||||||||||| |||||| | | ||||| ||| | || ||||||||
Sbjct: 1275 atatttctgtattcgcgaattttaaagcgcgctacgctaatagagcctacggttccttgg 1216
Query: 318 gaaaccaacatcctcaaagaccatgccatcaaggtcgataattattacgagttcacta 375
| |||||||||| |||| ||||||||||||||||| | || ||||| ||| ||||||
Sbjct: 1215 aagaccaacatccccaaaaaccatgccatcaaggtcaacaagtattatgagctcacta 1158
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 123,830
Number of extensions: 2072
Number of successful extensions: 2072
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 2071
Number of HSP's successfully gapped: 5
Length of query: 1168
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1151
Effective length of database: 8,119,229
Effective search space: 9345232579
Effective search space used: 9345232579
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)