BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06874 (UTR included)
(1348 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A1H09 894 0.0
BF01041B1A02 601 e-171
>BF01054A1H09
Length = 710
Score = 894 bits (451), Expect = 0.0
Identities = 466/470 (99%), Gaps = 2/470 (0%)
Strand = Plus / Plus
Query: 346 atgacttgtgtgtctttttcaatattttgtactcatttaattgttatgtaaaaacttgtg 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 atgacttgtgtgtctttttcaatattttgtactcatttaattgttatgtaaaaacttgtg 68
Query: 406 atagcacaaatttatggtggtgtaattatttttatggttttgtgtgaattgacatataat 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atagcacaaatttatggtggtgtaattatttttatggttttgtgtgaattgacatataat 128
Query: 466 ctgtatatagctctaatattataaaataaaaagaaatggcttcagacatcttaggaccct 525
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 129 ctgtatatagctctaatattataa--taaaaagaaatggcttcagacatcttaggaccct 186
Query: 526 ctacagctgaaatccgcgagaatttggtcacaacggctgtcaagttcctctcaaatccga 585
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 187 ctacagctgaaatccgcgagaatttggtcacgacggctgtcaagttcctctcaaatccga 246
Query: 586 atgttcagagatgtaccatggagagtaaggaacgttttcttcgttccaaaggcctgactg 645
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 247 atgttcagagatgtaccatggagagtaaggaacgttttcttcgttccaaaggcctgaccg 306
Query: 646 atgccgaaatagctaaggctatagaaaaatgtggagagttcctggacgtaccaacgctgg 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atgccgaaatagctaaggctatagaaaaatgtggagagttcctggacgtaccaacgctgg 366
Query: 706 cctccgaattgatgctgttcaatcattcgagaaggtcgtggttcagagaaagaattctac 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cctccgaattgatgctgttcaatcattcgagaaggtcgtggttcagagaaagaattctac 426
Query: 766 ctctcatagtttacggcggtgttatatatggctgctattggttctacaag 815
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctctcatagtttacggcggtgttatatatggctgctattggttctacaag 476
>BF01041B1A02
Length = 758
Score = 601 bits (303), Expect = e-171
Identities = 318/323 (98%)
Strand = Plus / Plus
Query: 1026 ttttaattaatgggcgcttctaaaataaacgaaaactttattctctctattattccaaaa 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ttttaattaatgggcgcttctaaaataaacgaaaactttattctctctattattccaaaa 273
Query: 1086 aaaattttcagcgcaaaatcagaccgaaataatttcctaacttgactcaataggaattta 1145
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aaaaatttcagcacaaaatcagaccgaaataatttcctaacttgactcaataggaattta 333
Query: 1146 taaaaaaatgttattattaaaagccacgaaataaataaaataaatttttgtattaattca 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 taaaaaaatgttattattaaaagccacgaaataaataaaataaatttttgtattaattca 393
Query: 1206 tataaaaaataaaatgttttaaacaaggtaatttacatcgatattttttttataccgtga 1265
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tataaaaaataaaatgttttaaacaaggtaatttacatcgatattttttttataccgtgg 453
Query: 1266 aaaaattaatttgattgctgttttaaggattcgctataaatggatttaaagtccactttt 1325
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aaaaattaatttgattgcaattttaaggattcgctataaatggatttaaagtccactttt 513
Query: 1326 acgttttacttattaggaatgaa 1348
|||||||||||||||||||||||
Sbjct: 514 acgttttacttattaggaatgaa 536
Score = 214 bits (108), Expect = 3e-55
Identities = 121/124 (97%), Gaps = 1/124 (0%)
Strand = Plus / Plus
Query: 883 atgtatggtaaa-tttttgttgtattgtatatgactacagttattgtcgattgccatata 941
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 35 atgtatggtaaaatttttgttgtattgtatatgactacagtaattgtcgattgccatata 94
Query: 942 tcggactgtttataaagacgtcatattttcccccggtttttcttatatttcatacctaat 1001
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 95 tcggactgtttataaagacgtcatattttcccccgctttttcttatatttcatacctaat 154
Query: 1002 attt 1005
||||
Sbjct: 155 attt 158
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 260,854
Number of extensions: 6901
Number of successful extensions: 6901
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6899
Number of HSP's successfully gapped: 3
Length of query: 1348
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1331
Effective length of database: 8,119,229
Effective search space: 10806693799
Effective search space used: 10806693799
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)