BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06875 (UTR included)
(2074 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060A2C04 262 2e-69
>BF01060A2C04
Length = 844
Score = 262 bits (132), Expect = 2e-69
Identities = 232/262 (88%), Gaps = 10/262 (3%)
Strand = Plus / Minus
Query: 1 tatttttatggaatttgtttttgggatcccaaatcattggttcttttt-ggaatagtttc 59
|||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||| |
Sbjct: 504 tatttttatggaatttgtttttggaatcccaaatgattggttcttttttggaatagttcc 445
Query: 60 aaaaactggaatgtttcttttttggaccactccattttgatttatctgccacggcacaag 119
|||||||||||| |||||||| |||||||| |||| |||||| ||||| |||| || |||
Sbjct: 444 aaaaactggaatatttcttttatggaccacaccatattgattgatctg-cacgtcataag 386
Query: 120 gatgaaaacttaaatgaagcgagagcgcgaatgtaaacactaaacacaacgctcgctttt 179
| |||||| || ||||||||||||||||||||| ||||||| |||||||| |||
Sbjct: 385 gttgaaaaatttaatgaagcgagagcgcgaatg-------taaacaccacgctcgcgttt 333
Query: 180 gttgcaaggtcctttgactcttgcccagattaccgctccggaccgcgagcgctgcgaggc 239
||||||||||||||||| || |||||| |||||||||||||| ||||| |||||||||||
Sbjct: 332 gttgcaaggtcctttgattcatgcccaaattaccgctccgga-cgcgaccgctgcgaggc 274
Query: 240 gcgagacgagacgcgaggcgag 261
||||||||||| ||||||||||
Sbjct: 273 gcgagacgagaggcgaggcgag 252
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,742
Number of extensions: 4486
Number of successful extensions: 4486
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4482
Number of HSP's successfully gapped: 2
Length of query: 2074
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2057
Effective length of database: 8,119,229
Effective search space: 16701254053
Effective search space used: 16701254053
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)