BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06880 (UTR included)
(3547 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B1C10 1493 0.0
BF14_2454_C1 180 1e-44
>BF01038B1C10
Length = 784
Score = 1493 bits (753), Expect = 0.0
Identities = 774/781 (99%)
Strand = Plus / Plus
Query: 2137 gatatcagaagatcgacccggagctagtgttaccgacgatgcgatcggccgtcgaggaac 2196
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 gatatcagaagatcgatccggagctagtgttaccgacgatgcgatcagccgtcgaggaac 60
Query: 2197 agctcaacctcatcgcaatcggtcgagccgatttccacgcggtgttgactcacaccacgg 2256
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 agctcaacctcatcgcaatcggtcgagccgatttccacgcggtgttgagtcacaccacgg 120
Query: 2257 agatcttcaggcggaagttccaatacttcgtgaggtccatagaggccatggaccaactgt 2316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatcttcaggcggaagttccaatacttcgtgaggtccatagaggccatggaccaactgt 180
Query: 2317 tcgaggtcagcttttcgtcgctcaagaccagcggcaaggcgctgtcccgctgcggcaagt 2376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgaggtcagcttttcgtcgctcaagaccagcggcaaggcgctgtcccgctgcggcaagt 240
Query: 2377 gcaggagatacatgagatacatacaggcgaagcccgcccgcctgcactgctcccactgtg 2436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaggagatacatgagatacatacaggcgaagcccgcccgcctgcactgctcccactgtg 300
Query: 2437 acgacacctacacgctgccccagcacggcacggtccgcatttaccgcgagctgaagtgtc 2496
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgacacctacacgctgcctcagcacggcacggtccgcatttaccgcgagctgaagtgtc 360
Query: 2497 ctctggacgacttcgagctgctgtcctggtccaccggcagcaaagggaagagcttcccgc 2556
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 361 ctctggacgacttcgagctgctgtcctggtccaccggcagcaaggggaagagcttcccgc 420
Query: 2557 tctgcccttactgctacaatcacccaccattcagggatatgaagaagggcttcggctgta 2616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctgcccttactgctacaatcacccaccattcagggatatgaagaagggcttcggctgta 480
Query: 2617 actcctgcactcaccccacttgtccctacggcgtgaactccaccggcgtctccggctgtg 2676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actcctgcactcaccccacttgtccctacggcgtgaactccaccggcgtctccggctgtg 540
Query: 2677 tcgaatgtgatggagttttagttttggatccctcggcgccgaagtggaagctggcgtgta 2736
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcgagtgtgatggagttttagttttggatccctcggcgccgaagtggaagctggcgtgta 600
Query: 2737 accgttgtgacgtcatcataaacgtgttcgaggacgcgagccgcgtgtccgtgtgcgagg 2796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 accgttgtgacgtcatcataaacgtgttcgaggacgcgagccgcgtgtccgtgtgcgagg 660
Query: 2797 cggcgtgcgcgtgcggcgctcagttagtgtgcgtcgagtaccgcgccgagcggaccaagc 2856
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccgcgtgcgcgtgcggcgctcagttagtgtgcgtcgagtaccgcgccgagcggaccaagc 720
Query: 2857 tgccggccgcgctcaccgagatgaccgcctgcctttactgcgagccggctttcagcgcgc 2916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgccggccgcgctcaccgagatgaccgcctgcctttactgcgagccggctttcagcgcgc 780
Query: 2917 t 2917
|
Sbjct: 781 t 781
>BF14_2454_C1
Length = 855
Score = 180 bits (91), Expect = 1e-44
Identities = 91/91 (100%)
Strand = Plus / Minus
Query: 1 cacataattcaaggcctactaatgtattaaacaagcaatccttattctaagcaacagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 cacataattcaaggcctactaatgtattaaacaagcaatccttattctaagcaacagcaa 33
Query: 61 tccgtaggaatcacacagcaaaatattgaat 91
|||||||||||||||||||||||||||||||
Sbjct: 32 tccgtaggaatcacacagcaaaatattgaat 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 377,614
Number of extensions: 7587
Number of successful extensions: 7587
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7587
Number of HSP's successfully gapped: 2
Length of query: 3547
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3529
Effective length of database: 8,109,745
Effective search space: 28619290105
Effective search space used: 28619290105
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)