BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06892 (UTR included)
(1327 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 416 e-116
BF01049A2D11 86 2e-16
BF14_729_C2 82 3e-15
BF01011A1H06 78 4e-14
BF01033A1E02 70 1e-11
>BF14_729_C3
Length = 2041
Score = 416 bits (210), Expect = e-116
Identities = 358/407 (87%), Gaps = 5/407 (1%)
Strand = Plus / Plus
Query: 635 gaagtcagtagtgagtgaacacacaatatacaaaccaggccactgcattcggtttgataa 694
|||||||| |||| ||||||||||||| ||||||||||||||| |||||| ||||||||
Sbjct: 1247 gaagtcagcagtgtgtgaacacacaatggacaaaccaggccactacattcgttttgataa 1306
Query: 695 accactgatcctccctcgtgaagacaagtacataccaaggttaatctgcgaggctattga 754
||| | |||||| |||| ||||||||||| ||||| || ||||| |||||||||||||
Sbjct: 1307 acctcaaatcctcgctcgggaagacaagtatataccgagattaattcgcgaggctattga 1366
Query: 755 aattaaaaaatatcccaatttcaatagagaagttggctggaatctatcaaacacctggga 814
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1367 aattaaaaaacatcccaatttcaatagagaagatggctggaatctatcaaacacctggga 1426
Query: 815 ccgcctacgttaaaatataaaatcccatatccgtaaccccaccgcaggacctcgtgactc 874
|| | | | | ||||||||||||||||| |||| |||| |||||||||||||| ||| |
Sbjct: 1427 ccccgttcttaaaaatataaaatcccatgtccgaaaccacaccgcaggacctcaagacac 1486
Query: 875 cgtaagcgcattctgccggcatccagagcggtacgccagaaaattaacaaatcgttggcg 934
||| |||||||||||||||||||||||||||||||||| ||||| |||||| |||||
Sbjct: 1487 cgtgagcgcattctgccggcatccagagcggtacgccannnnattaagaaatcgatggcg 1546
Query: 935 gtagatgataaataacaa-gaccaact----gacattcacatctcgtcagcccgtgatca 989
|||||||||||||||||| |||||||| |||||||||| |||||| |||||||||||
Sbjct: 1547 gtagatgataaataacaaggaccaactgacagacattcacacctcgtctgcccgtgatca 1606
Query: 990 ccgttgctgtaaagtacctggaacgtcgggagtatgtagtttttaaa 1036
| ||||||| |||||| | | |||||||||| |||||||||||||||
Sbjct: 1607 cggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaa 1653
>BF01049A2D11
Length = 776
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 635 gaagtcagtagtgagtgaacacacaatatacaaaccaggccactgcattcggtttgataa 694
|||||||| ||| ||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 698 gaagtcagcagtatgtgaacacacaatggacaaaccaggccactacattcggtttgataa 757
Query: 695 accactgatcctccctcgt 713
||||| |||||| |||||
Sbjct: 758 accacaaatcctcgctcgt 776
>BF14_729_C2
Length = 1289
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 971 tctcgtcagcccgtgatcaccgttgctgtaaagtacctggaacgtcgggagtatgtagtt 1030
||||||| |||||||||||| ||||||| |||||| | | ||||||||||||||||||||
Sbjct: 528 tctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagtatgtagtt 587
Query: 1031 tttaa 1035
|||||
Sbjct: 588 tttaa 592
>BF01011A1H06
Length = 739
Score = 77.8 bits (39), Expect = 4e-14
Identities = 95/112 (84%), Gaps = 5/112 (4%)
Strand = Plus / Plus
Query: 923 aaatcgttggcggtagatgataaataacaag-accaactgacat----tcacatctcgtc 977
|||||| |||||| || |||| ||||||||| ||||||||||| ||||||||||||
Sbjct: 407 aaatcgatggcggcagttgatgaataacaaggaccaactgacagacactcacatctcgtc 466
Query: 978 agcccgtgatcaccgttgctgtaaagtacctggaacgtcgggagtatgtagt 1029
|||||||||||| ||| ||| |||||| | | |||||||||||||||||||
Sbjct: 467 tgcccgtgatcacggttactgaaaagtaaccgaaacgtcgggagtatgtagt 518
>BF01033A1E02
Length = 815
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 445 cggtaaatcttaagattgtccagtaaattttagtatttaccaatatgagttggtaaatgt 504
||||||||||||||||| |||| |||||| ||||||| ||| ||||||||||||||||
Sbjct: 637 cggtaaatcttaagattttccattaaattctagtattgacc--gatgagttggtaaatgt 580
Query: 505 tgaaaccaggacga 518
||||| |||||||
Sbjct: 579 tgaaaataggacga 566
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 225,854
Number of extensions: 6211
Number of successful extensions: 6211
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 6207
Number of HSP's successfully gapped: 5
Length of query: 1327
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1310
Effective length of database: 8,119,229
Effective search space: 10636189990
Effective search space used: 10636189990
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)