BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06910 (UTR included)
(2203 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A1H02 745 0.0
BF01060A2F05 440 e-123
>BF01022A1H02
Length = 670
Score = 745 bits (376), Expect = 0.0
Identities = 394/400 (98%)
Strand = Plus / Plus
Query: 1184 tggtgtgtccggccagctcattgattctatggcaaattcatttgttggtactagaagcta 1243
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 tggtgtgtccggccagctcattgattctatggcaaattcatttgttggtactaggagcta 60
Query: 1244 tatgtcgccggaacgtcttcaaggtacccattattcggtgcaatctgatatatggtcatt 1303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgtcgccggaacgtcttcaaggtacccattattcggtgcaatctgatatatggtcatt 120
Query: 1304 gggtttgtcgctcgtcgaaatggccattggcatgtatccaatcccaccaccagatgccaa 1363
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 gggtttgtcgcttgtcgaaatggccattggcatgtatccaatcccaccaccggatgccaa 180
Query: 1364 aacattggccgccattttcggtggtcaaaacgaagatcactcaccgggacaggctccaaa 1423
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 181 aacattggccgccattttcggtggtcaaaacgaagatcactcgcccggacaggctccaaa 240
Query: 1424 ctcgcctcgtccgatggctatattcgaattactcgactacatagtcaacgagccgccacc 1483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcgcctcgtccgatggctatattcgaattactcgactacatagtcaacgagccgccacc 300
Query: 1484 aaaattaccatcaggaatattctctgacgacttcaaagatttcgttgatcgctgcctcaa 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaattaccatcaggaatattctctgacgacttcaaagatttcgttgatcgctgcctcaa 360
Query: 1544 gaagaatccggacgagagggctgatcttaaaacgctcatg 1583
||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaagaatccggacgagagggctgatcttaaaacgctcatg 400
>BF01060A2F05
Length = 230
Score = 440 bits (222), Expect = e-123
Identities = 228/230 (99%)
Strand = Plus / Plus
Query: 321 tatataccgattctgtattcctccttgaggaaagcagcttatcctttattattgcatgta 380
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 tatataccgattctttattcctccttgaggaaagcagcttatcctttattattgcgtgta 60
Query: 381 gttgcgaatgaatctttttatactttgtagttaagtgtgcagtgattcatcggatttcat 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgcgaatgaatctttttatactttgtagttaagtgtgcagtgattcatcggatttcat 120
Query: 441 tttatacgtttcgataattttattaaatgccgtgatacaggtgtagtcaagatgagcaaa 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttatacgtttcgataattttattaaatgccgtgatacaggtgtagtcaagatgagcaaa 180
Query: 501 atgtctaagaataaattaaacttgacccttccaccagggtctatagacac 550
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgtctaagaataaattaaacttgacccttccaccagggtctatagacac 230
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 278,468
Number of extensions: 8074
Number of successful extensions: 8074
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8074
Number of HSP's successfully gapped: 2
Length of query: 2203
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2186
Effective length of database: 8,119,229
Effective search space: 17748634594
Effective search space used: 17748634594
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)