BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06914 (UTR included)
(2164 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1004_C1 1764 0.0
>BF14_1004_C1
Length = 908
Score = 1764 bits (890), Expect = 0.0
Identities = 899/902 (99%)
Strand = Plus / Plus
Query: 507 tgtctacttattttgacgttccttgtgacattttccaatggtcttctaagctcggagctg 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tgtctacttattttgacgttccttgtgacattttccaatggtcttctaagctcggagctg 66
Query: 567 actgagccagaatggttggacgtagtttctgctggtggaatgcacataggccatggtcgt 626
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 67 actgagccagaatggttggacgtagtttctgctggtggaatgcatataggccatggtcgt 126
Query: 627 actaagagattcgtagagcttaacgaaaatcagccaaacataccgcatcaggcatgccta 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 actaagagattcgtagagcttaacgaaaatcagccaaacataccgcatcaggcatgccta 186
Query: 687 ctaccgagtggcagagcgggacattgtcgccatttacattactgtatccaagaagacttt 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ctaccgagtggcagagcgggacattgtcgccatttacattactgtatccaagaagacttt 246
Query: 747 aagagggacttcatgaaattcatggactatctttgtattatacagcattcatctatcggt 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aagagggacttcatgaaattcatggactatctttgtattatacagcattcatctatcggt 306
Query: 807 gtgtgttgtcctgatgatcgtaccccggatgctatagacgcggtcgccggagacttacca 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtgtgttgtcctgatgatcgtaccccggatgctatagacgcggtcgccggagacttacca 366
Query: 867 gccacagcacctagagacgaaaacgaagtcactctgaagatagatcgcgctgagaataga 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gccacagcacctagagacgaaaacgaagtcactctgaagatagatcgcgctgagaataga 426
Query: 927 ggctgtgggttgagcactcgcgcgcaggcccgagtgactggagccagtcctgccaatcca 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ggctgtgggttgagcactcgcgcgcaggcccgagtgactggagccagtcctgccaatcca 486
Query: 987 cgggaatggccttggatggcttccgtgactcccgagggaagggaccagtggtgcggaggt 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cgggaatggccttggatggcttccgtgactcccgagggaagggaccagtggtgcggaggt 546
Query: 1047 tcactcataaccgatcgacatgtactcagtgcggcgcattgcacttatgggtacgaaccc 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tcactcataaccgatcgacatgtactcagtgcggcgcattgcacttatgggtacgaaccc 606
Query: 1107 agcgaattgttcgtccggctcggagaatacgactttaagagaaccaacgattcccgttca 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 agcgaattgttcgtccggctcggagaatacgactttaagagaaccaacgattcccgttca 666
Query: 1167 tataactttagggtgatcgagaagagggaacatgaaatgtttgacagcgctacctaccac 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tataactttagggtgatcgagaagagggaacatgaaatgtttgacagcgctacctaccac 726
Query: 1227 cacgacgtcgtcatacttaaattacacagagcagcggtgttcaatacatatgtgtggcca 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 cacgacgtcgtcatacttaaattacacagagcagcggtgttcaatacatatgtgtggcca 786
Query: 1287 atatgtctccctccccggggattggagttggacaacgaaatcgctacagtgatcggttgg 1346
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 787 atatgtctccctccccggggtttggagttggacaacgaaatcgctacagtgatcggttgg 846
Query: 1347 ggcactcaatggtacgggggtccagcgagtcacgtcctcatggaagtttctgtacctata 1406
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 847 ggcactcaatggtacgggggtccagcgagtcacgtcctcatggaagtttctgtaccgata 906
Query: 1407 tg 1408
||
Sbjct: 907 tg 908
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 218,568
Number of extensions: 4101
Number of successful extensions: 4101
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4101
Number of HSP's successfully gapped: 1
Length of query: 2164
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2147
Effective length of database: 8,119,229
Effective search space: 17431984663
Effective search space used: 17431984663
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)