BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06923 (UTR included)
(3235 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01016B2E12 1251 0.0
>BF01016B2E12
Length = 663
Score = 1251 bits (631), Expect = 0.0
Identities = 655/663 (98%)
Strand = Plus / Plus
Query: 2167 tactgaaccactcacggactcacgaaagaagagattttccttgcaaacattgtggtgaga 2226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tactgaaccactcacggactcacgaaagaagagattttccttgcaaacattgtggtgaga 60
Query: 2227 cgtcctcgtcatacgctgcattatacgcgcacattgcaaaagtacacaggctaaataaga 2286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgtcctcgtcatacgctgcattatacgcgcacattgcaaaagtacacaggctaaataaga 120
Query: 2287 gatacaaatgtcctatttgtgacgaaaagtttgcttcatataaatataggataaaacatc 2346
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 gatacaaatgtcctatttgtgacgaaaagtttgcttcctataaatataggataaaacatc 180
Query: 2347 tgaataccgtccacggtgaaaaaactacactattcccctgtccgtcatgtccaaaggtat 2406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaataccgtccacggtgaaaaaactacactattcccctgtccgtcatgtccaaaggtat 240
Query: 2407 tcgatctctgcagccgcagaaccgctcacgtcagatctcatcatctgcaggagaggaacc 2466
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 241 tcgatctctgcagccgcagaacagctcacgtcagatctcatcatctgcaggagagaaacc 300
Query: 2467 acacttgttccgtctgtgggatgaagttcttcagtaactatgagctgcaggagcacagcg 2526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acacttgttccgtctgtgggatgaagttcttcagtaactatgagctgcaggagcacagcg 360
Query: 2527 tgaagcacgtcggtgctagaatataccagtgcgacgtttgtaagaaatcgtacgccaggt 2586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaagcacgtcggtgctagaatataccagtgcgacgtttgtaagaaatcgtacgccaggt 420
Query: 2587 tgaaaacattgagggaacatatgcgtatacataacaacgacagacgtttcgtgtgtccgg 2646
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 421 tgaaaaccttgagggaacatatgcgtatacataacaacgacagacgattcgtgtgtccgg 480
Query: 2647 cctgcggggcctcgtttatacagaaatgtagtttaaaacaacacgtgagagtgcatcatc 2706
|||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct: 481 cctgcggggcctcgtttatacagaaatgcagtttaaaacaacatgttagagtgcatcatc 540
Query: 2707 ccattcaggtcaagactgatatgttctagaacatttaaatataaattgagattacagaat 2766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccattcaggtcaagactgatatgttctagaacatttaaatataaattgagattacagaat 600
Query: 2767 tttgtattaaatattgatggggacattagatactttataatgttcaaagatcacaaaatc 2826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttgtattaaatattgatggggacattagatactttataatgttcaaagatcacaaaatc 660
Query: 2827 cta 2829
|||
Sbjct: 661 cta 663
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 362,820
Number of extensions: 7164
Number of successful extensions: 7164
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7164
Number of HSP's successfully gapped: 1
Length of query: 3235
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3217
Effective length of database: 8,109,745
Effective search space: 26089049665
Effective search space used: 26089049665
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)