BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06955 (UTR included)
(1297 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 139 1e-32
BF14_335_C4 135 2e-31
BF01043B1E03 100 1e-20
BF01047B2H03 96 2e-19
BF01016B1E06 92 3e-18
BF01049B1F01 82 3e-15
BF01060B1D11 78 4e-14
BF01019A1H08 76 2e-13
BF01031B2E06 72 2e-12
>BF14_335_C2
Length = 1827
Score = 139 bits (70), Expect = 1e-32
Identities = 206/247 (83%), Gaps = 7/247 (2%)
Strand = Plus / Minus
Query: 761 gagaggtatagcagcaaaatctctctacaactt-ctaaaagacctgggcctttccagaac 819
|||||||||| |||| ||||||||||||| | | |||||| || ||||||| ||||||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 820 tcacatcaattcaattttagaacgtacttcgaaggcagccctagtaggttcgtttcaaat 879
| ||| || |||| | || ||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaat 988
Query: 880 ttggttaggtagagaggggtgcatggatggttgaggtgagcgt--tcaacgcgctttaaa 937
|||||||| ||||| || || |||| ||| ||||||||||| | ||||| ||| |
Sbjct: 987 ttggttag---gagagaggagcttggacggtggaggtgagcgttatgtacgcgagttaga 931
Query: 938 taagggccccttaaaccaacatctgggtcgcaagttccaggcactattgaaactcctctc 997
| |||| | |||||||| ||| ||| ||||||| | ||||||||| ||||| ||||||||
Sbjct: 930 t-aggggctcttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctc 872
Query: 998 cctgcaa 1004
|||||||
Sbjct: 871 cctgcaa 865
>BF14_335_C4
Length = 1491
Score = 135 bits (68), Expect = 2e-31
Identities = 128/148 (86%)
Strand = Plus / Plus
Query: 851 aaggcagccctagtaggttcgtttcaaatttggttaggtagagaggggtgcatggatggt 910
||||||||||||| ||| ||| |||| |||||||||||||||||| || || |||| ||
Sbjct: 1155 aaggcagccctagcaggatcgattcatatttggttaggtagagagaggagcttggaaagt 1214
Query: 911 tgaggtgagcgttcaacgcgctttaaataagggccccttaaaccaacatctgggtcgcaa 970
||||||||||||| || |||| | | |||| ||||||||||||| ||| |||||||||||
Sbjct: 1215 tgaggtgagcgtttaatgcgcgtaagataaaggccccttaaacctacacctgggtcgcaa 1274
Query: 971 gttccaggcactattgaaactcctctcc 998
|| ||||||||| ||||| |||||||||
Sbjct: 1275 gtcccaggcactgttgaagctcctctcc 1302
>BF01043B1E03
Length = 830
Score = 99.6 bits (50), Expect = 1e-20
Identities = 157/192 (81%), Gaps = 3/192 (1%)
Strand = Plus / Plus
Query: 813 ccagaactcacatcaattcaattttagaacgtacttcgaaggcagccctagtaggttcgt 872
|||||||| ||||||| ||| | || ||||||||| | ||||||| ||||| ||| ||
Sbjct: 264 ccagaactaacatcaaatcattcttggaacgtactgcaaaggcaggcctag---gtttgt 320
Query: 873 ttcaaatttggttaggtagagaggggtgcatggatggttgaggtgagcgttcaacgcgct 932
||||||||||||||||||||||| || | |||| || ||||||||| | |||||||
Sbjct: 321 ttcaaatttggttaggtagagagaggaccttggacagtggaggtgagcacttaacgcgcg 380
Query: 933 ttaaataagggccccttaaaccaacatctgggtcgcaagttccaggcactattgaaactc 992
||| ||| |||||| ||||||| | | |||||| |||||| ||| ||||||||| | |||
Sbjct: 381 ttagataggggccctttaaacctatacctgggttgcaagtcccaagcactattggacctc 440
Query: 993 ctctccctgcaa 1004
||||||| ||||
Sbjct: 441 ctctcccagcaa 452
>BF01047B2H03
Length = 758
Score = 95.6 bits (48), Expect = 2e-19
Identities = 91/104 (87%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 234 gacttcaattccataaacagtttatgataggagaacaaagtaac-agagcacggttagga 292
||||||||||||||||||||||||||||||||| |||||||||| |||| | | ||||||
Sbjct: 627 gacttcaattccataaacagtttatgataggagcacaaagtaacgagagtaggattagga 568
Query: 293 tcaagtgagaaggcccgagataaggacatatgaaagccttttat 336
||||| ||||||||| ||||| ||| |||| ||| |||||||
Sbjct: 567 tcaaggaagaaggcccaagatacggatatattgaagtcttttat 524
>BF01016B1E06
Length = 606
Score = 91.7 bits (46), Expect = 3e-18
Identities = 113/133 (84%), Gaps = 3/133 (2%)
Strand = Plus / Minus
Query: 872 tttcaaatttggttaggtagagaggggtgcatggatggttgaggtgagcgttcaacgcgc 931
|||||||||||||||||||||||| || | |||| ||| |||||||||||| ||||||
Sbjct: 323 tttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaacgcg- 265
Query: 932 tttaaataagggccccttaaaccaacatctgggtcgcaagttccaggcactattgaaact 991
||| || ||||||||||||||| ||| ||||||||| | | || |||||| ||||| ||
Sbjct: 264 -ttagat-agggccccttaaacctacacctgggtcgctactccccggcactgttgaagct 207
Query: 992 cctctccctgcaa 1004
|||||| ||||||
Sbjct: 206 cctctctctgcaa 194
>BF01049B1F01
Length = 840
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 940 agggccccttaaaccaacatctgggtcgcaagttccaggcactattgaaactcctctccc 999
||||||||||| ||| ||| ||||||||||||| ||||||||| ||||| ||||||||||
Sbjct: 653 agggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccc 594
Query: 1000 tgcaa 1004
|||||
Sbjct: 593 tgcaa 589
>BF01060B1D11
Length = 799
Score = 77.8 bits (39), Expect = 4e-14
Identities = 79/91 (86%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 234 gacttcaattccataaacagtttatgataggagaacaaagtaac-agagcacggttagga 292
||||||||||||| ||||||||||||||||||| |||||||||| |||| | | ||||||
Sbjct: 455 gacttcaattccacaaacagtttatgataggagcacaaagtaacgagagtaggattagga 396
Query: 293 tcaagtgagaaggcccgagataaggacatat 323
||||| ||||||| | ||||| ||| ||||
Sbjct: 395 tcaaggaagaaggctcaagatatggatatat 365
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 535 ggggtaaaggtaccgaaaatacttgctatatctgcgaaacggtagttggaagcgctaagc 594
||||||||| ||||||||| ||||||||||| ||||| | || |||||||| |||||||
Sbjct: 203 ggggtaaagataccgaaaaaacttgctatatttgcgagaaggcagttggaattgctaagc 144
Query: 595 attttctggtggga 608
|||| ||| |||||
Sbjct: 143 atttgctgatggga 130
>BF01019A1H08
Length = 504
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 943 gccccttaaaccaacatctgggtcgcaagttccaggcactattgaaactcctctccctgc 1002
|||||||||||| ||| ||||||||||| | ||||||||| ||||| |||||||||||||
Sbjct: 482 gccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgc 423
Query: 1003 aa 1004
||
Sbjct: 422 aa 421
>BF01031B2E06
Length = 707
Score = 71.9 bits (36), Expect = 2e-12
Identities = 103/124 (83%), Gaps = 1/124 (0%)
Strand = Plus / Plus
Query: 736 atttgtacgcggtagaagtaggagcgagaggtatagcagcaaaatctctctacaa-cttc 794
||||||||||||||||||| |||||||| | | || ||| ||||||||| |||| || |
Sbjct: 513 atttgtacgcggtagaagtgggagcgagcgttgtaaaagctaaatctctccacaacctac 572
Query: 795 taaaagacctgggcctttccagaactcacatcaattcaattttagaacgtacttcgaagg 854
||||| | ||||||| |||||| || ||||||| | | |||||||| |||||||||||
Sbjct: 573 taaaaaccttgggcctgtccagatctaacatcaaataatctttagaacatacttcgaagg 632
Query: 855 cagc 858
||||
Sbjct: 633 cagc 636
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 134,300
Number of extensions: 2378
Number of successful extensions: 2378
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 2372
Number of HSP's successfully gapped: 11
Length of query: 1297
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1280
Effective length of database: 8,119,229
Effective search space: 10392613120
Effective search space used: 10392613120
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)