BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06960 (UTR included)
(3013 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A2H12 1209 0.0
>BF01029A2H12
Length = 654
Score = 1209 bits (610), Expect = 0.0
Identities = 643/654 (98%)
Strand = Plus / Plus
Query: 547 cagatgccggtaatacagaaacgttaacgcctatagtatgcaaatattgtcaacaaccag 606
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 1 cagatgccggtaatacagaagcgttaacacctatagtatgcaaatattgtcaacaaccag 60
Query: 607 aaaacaaacaatacaagccatgcttagtttgcgagaaatgcaaatgtgcagtgcatttaa 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaacaaacaatacaagccatgcttagtttgcgagaaatgcaaatgtgcagtgcatttaa 120
Query: 667 tttgtttacgacgtcctggtacacctggagatatagacggagatgttttctttgacttca 726
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 tttgtttacgacgtcctggtacacctggcgatatagacggagatgttttctttgacttca 180
Query: 727 catgcttagaatgttcacccactaaggaagagctgtttgaacgcaacaaattcccttggg 786
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 catgcttagaatgttcacccactaaagaagagctgtttgaacgcaacaaattcccttggg 240
Query: 787 tccatgtactgttgttaacattaaatcacctgagcgagcacatgcagggtataagcaaca 846
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccatgtgctgttgttaacattaaatcacctgagcgagcacatgcagggtataagcaaca 300
Query: 847 gcggctacttccattacaaaacacacatctgttcattcgtcgacagaaattggaccctgt 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcggctacttccattacaaaacacacatctgttcattcgtcgacagaaattggaccctgt 360
Query: 907 tgtttgggactcgcaatcgtaagaagaactggataggaacaatatccggagcattgtcgg 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtttgggactcgcaatcgtaagaagaactggataggaacaatatccggagcattgtcgg 420
Query: 967 tgtacagcaatacattcttccgatcgggctctgttgccctcggagagtcgggatggtgga 1026
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 421 tgtacagcaatacattcttccgatcgggctccgttgccctcggagagtcgggatggtgga 480
Query: 1027 aacttatgcatggtttttcccccgcggtcgctgcacatatcttacaagaaatgaataaag 1086
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 481 aacttatgcatggtttttccccagcggtcgctgcacatatcttacaagaaatgaataaag 540
Query: 1087 aaaaaacaaaaggccagcctcgcaatcagttcacattggactccgtgttgtttattagta 1146
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 541 aaaaaacaaaaggccagcctcgcaaccagttcacactggactccgtgttgtttattagta 600
Query: 1147 aaatcaaattaatgggttacggtgtctatctaaacgtggaaatgaacccaaata 1200
||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 601 aaatcaaattaatgggttacggtgtctatctaaacatagaaatgaacccaaata 654
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 324,079
Number of extensions: 6624
Number of successful extensions: 6624
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6624
Number of HSP's successfully gapped: 1
Length of query: 3013
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2995
Effective length of database: 8,109,745
Effective search space: 24288686275
Effective search space used: 24288686275
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)