BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06966 (UTR included)
(6034 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3380_C1 1522 0.0
>BF14_3380_C1
Length = 1013
Score = 1522 bits (768), Expect = 0.0
Identities = 801/813 (98%)
Strand = Plus / Plus
Query: 3958 gagtgacaatatattcatttcatactgaagacaatcttactaactttagaccaacgaaac 4017
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 gagtgacaatatattcatttcatactgaagacaatcttaccaactttagaccaacgaaac 260
Query: 4018 aaatgaaacgacgtcaaacaaaatctacaactaacatcaccctgctacaggccgaacaaa 4077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgaaacgacgtcaaacaaaatctacaactaacatcaccctgctacaggccgaacaaa 320
Query: 4078 gtgaactaatcccaataagctgtctagaagtgtcgagggatggccaacttgcggctagtg 4137
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gtgaactgatcccaataagctgtctagaagtgtcgagggatggccaactagcggctagtg 380
Query: 4138 gttgcgcgagaggcttagttagagtatggcaactctctacccacagactgcaaaataccc 4197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttgcgcgagaggcttagttagagtatggcaactctctacccacagactgcaaaataccc 440
Query: 4198 taagtggccatatgggtcacataacctgcgttactttcagcccaaataatttaatggtat 4257
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 taagtggccatatgggtcacataacctgcgttacattcagcccaaataatttaatggtat 500
Query: 4258 taagtggatccgaggacagaactgttgtagtctggcagttggcagataactctgcatcat 4317
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 taagtggatccgaggacagaactgttgtagtctggcagttggcagataactcagcatcat 560
Query: 4318 tgacgtataagggccaccaatccgctcttcaagtactgttgatgatgtctgacggtagac 4377
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taacgtataagggccaccaatccgctcttcaagtactgttgatgatgtctgacggtagac 620
Query: 4378 gcgcaatgtccggagaccgcgcccgcactgtacacgtttggctcgtggactcaggcatcg 4437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcgcaatgtccggagaccgcgcccgcactgtacacgtttggctcgtggactcaggcatcg 680
Query: 4438 tactgctctccgcaaactgtccaacaaccagcattgatgttacccttaatatgaagtttg 4497
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 681 tactgctctccgcaaactgtccaacaaccagcattcatgttacccttaatatgaagtttg 740
Query: 4498 cggttttatctgatggtgataattcagttcgaatctggaccttagccgaaggagacagtg 4557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cggttttatctgatggtgataattcagttcgaatctggaccttagccgaaggagacagtg 800
Query: 4558 gcgaggaaaagcgttccgtgtcccacgcagagcgtgttacctgcttcgctcttacagcgg 4617
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 801 gcgaggaaaaacgttccgtgtcccacgcagagcgtgttacctgctttgctcttacagcgg 860
Query: 4618 attcacagcacgtggtgactggatctatggacatgtcgctcaaagtttggcaacttaatg 4677
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 861 attcacagcacgtggtgactggatctatggacatgtcgctcnnngtttggcaacttaatg 920
Query: 4678 gtggaaagttatcgcaggttttggtaggtcataccgacattgtgacttgtgttgctgtct 4737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 gtggaaagttatcgcaggttttggtaggtcataccgacattgtgacttgtgttgctgtct 980
Query: 4738 cgatcacaaacaagactcaagtggtatctggtt 4770
|||||||||||||||||||||||||||||||||
Sbjct: 981 cgatcacaaacaagactcaagtggtatctggtt 1013
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 106,483
Number of extensions: 11979
Number of successful extensions: 11979
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11979
Number of HSP's successfully gapped: 1
Length of query: 6034
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6016
Effective length of database: 8,109,745
Effective search space: 48788225920
Effective search space used: 48788225920
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)