BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06978 (UTR included)
(4141 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1438_C1 1808 0.0
>BF14_1438_C1
Length = 975
Score = 1808 bits (912), Expect = 0.0
Identities = 936/944 (99%)
Strand = Plus / Plus
Query: 3198 ccgagatgccttctcagtggaacagctataatccgtcgtcgagtagaatgtgtgagcgat 3257
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 ccgagatgccttctcagtggaacagctataatccgtcgtcgagtcgaatgtgtgagcgat 60
Query: 3258 aacggtacgctagtctcagactcggcgtgtgtatacagcgagcgacccgagcatttgcgt 3317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacggtacgctagtctcagactcggcgtgtgtatacagcgagcgacccgagcatttgcgt 120
Query: 3318 cgcgtacaaccttgtagagcagtctggtctgtgggtccctggagcaagtgcaaaggccct 3377
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 cgcgtacaaccttgtaaagcagtctggcctgtgggtccctggagcaagtgcaaaggccct 180
Query: 3378 tgcggtgagagcaaacagcaccgcgtgctgcgctgcgtgtggcgagcaccctccatacaa 3437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcggtgagagcaaacagcaccgcgtgctgcgctgcgtgtggcgagcaccctccatacaa 240
Query: 3438 ggaaatacacgcacgagaagagaaagacctgccgccgcctgtgtacaagaacggcctcca 3497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaaatacacgcacgagaagagaaagacctgccgccgcctgtgtacaagaacggcctcca 300
Query: 3498 gttgcaagggattgtaagcagagtaactgtgtcagggatgctgtttgcagagacacctca 3557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttgcaagggattgtaagcagagtaactgtgtcagggatgctgtttgcagagacacctca 360
Query: 3558 cgtttctgtgagaacgtccgcgccatgaatatgtgcgcgctccagcgctaccagaggcag 3617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgtttctgtgagaacgtccgcgccatgaatatgtgcgcgctccagcgctaccagaggcag 420
Query: 3618 tgctgcaagacctgcgaggattaaatttgcagagcgttccacgaaattctggaatgttcc 3677
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 421 tgctgcaagacctgcgaggattaaatttgcagagcattccacgaaattctggaatgttcc 480
Query: 3678 ggaaaaattctagaaagttcgagagtattttaaatcgttatcagagcatttatttaaatg 3737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaaaaattctagaaagttcgagagtattttaaatcgttatcagagcatttatttaaatg 540
Query: 3738 ttggtatggtgtaatgtcgatgaaattgtgttttattctataggctattaaaaattggtt 3797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttggtatggtgtaatgtcgatgaaattgtgttttattctataggctattaaaaattggtt 600
Query: 3798 ttcatatcaaattcttggctgttttgtctggatgttattaaatgttgcaacttgatggtc 3857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttcatatcaaattcttggctgttttgtctggatgttattaaatgttgcaacttgatggtc 660
Query: 3858 ttagaagaattattcagaaatatttctgatagctttgctatatgaagctctgatggatta 3917
|||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||
Sbjct: 661 ttagaagaattattcagaaatatttctgatcgctttgctatatgaagctctgctgggtta 720
Query: 3918 tttttattctattaacataatatttttttttatgttacataagttttggaactgatagat 3977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tttttattctattaacataatatttttttttatgttacataagttttggaactgatagat 780
Query: 3978 ttagtaaactaacttcagcacgttgcctagtcgttatttcacttagtatttagacgacac 4037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttagtaaactaacttcagcacgttgcctagtcgttatttcacttagtatttagacgacac 840
Query: 4038 gataacgatacgacattctgatcgtttgttataaaagcttttaaatacatcggatgtcat 4097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gataacgatacgacattctgatcgtttgttataaaagcttttaaatacatcggatgtcat 900
Query: 4098 gtaggaaaaaatcttttacagataatattttgcattttaaattt 4141
|||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtaggagaaaatcttttacagataatattttgcattttaaattt 944
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 401,459
Number of extensions: 6797
Number of successful extensions: 6797
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6797
Number of HSP's successfully gapped: 1
Length of query: 4141
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4123
Effective length of database: 8,109,745
Effective search space: 33436478635
Effective search space used: 33436478635
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)