BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06991 (UTR included)
(1480 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2018_C1 745 0.0
BF01016B1E06 105 2e-22
BF01043B1E03 98 5e-20
BF14_335_C2 78 5e-14
BF01049B1F01 76 2e-13
BF14_335_C4 76 2e-13
BF01019A1H08 68 4e-11
>BF14_2018_C1
Length = 1933
Score = 745 bits (376), Expect = 0.0
Identities = 408/418 (97%), Gaps = 1/418 (0%)
Strand = Plus / Plus
Query: 1063 aatgtatgaaaatgtataggtattaagtccttgacaacgcaattgaaatctataagacgt 1122
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 aatgtatgaaaatgtataggtattaagtccttgannt-gcaattgaaatctataagacgt 59
Query: 1123 acgtatgtaagattcattatatttaaaagaggctcagtttagtagttatcgtatcttatt 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 acgtatgtaagattcattatatttaaaagaggctcagtttagtagttatcgtatcttatt 119
Query: 1183 attatgtagatagagttgattttgcaactatttttaaaatttaaccgccaacccttctat 1242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 attatgtagatagagttgattttgcaactatttttaaaatttaaccgccaacccttctat 179
Query: 1243 tacgaagtcgtgaggtagaaaatatttgataatttaaagtaacatggtgctgtttgcctc 1302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tacgaagtcgtgaggtagaaaatatttgataatttaaagtaacatggtgctgtttgcctc 239
Query: 1303 tctgctagttaattatatgttgaattgaagtaatgtagagtggacaatggatcgacccga 1362
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 240 tctgctagttaattatatgttgaattgaaataatatagagtggacaatggatcgacccga 299
Query: 1363 gagggattccaacccgggactggcgaggtgtctcacagacgctctaacttttaagctaac 1422
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |
Sbjct: 300 gagggattccaacccgggaatggcgaggtgtctcacagacgctccaacttttaagctatc 359
Query: 1423 gggaccttcgggagtcgatgcttgcgtcattctattttattttaaatttaatccaaat 1480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gagaccttcgggagtcgatgcttgcgtcattctattttattttaaatttaatccaaat 417
>BF01016B1E06
Length = 606
Score = 105 bits (53), Expect = 2e-22
Identities = 110/128 (85%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 268 ttttttcaaatttggttaagtagaaagaggagcttggacggtgtagattagcgcttagcg 327
|||||||||||||||||| ||||| ||||||| |||||||||| || | |||| ||| ||
Sbjct: 326 ttttttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaacg 267
Query: 328 cgcgttagatagggacccttaaacctacacctgggtcgcaattcccaggtagtgttaaag 387
|| |||||||||| |||||||||||||||||||||||| | |||| || | |||| |||
Sbjct: 266 cg--ttagatagggccccttaaacctacacctgggtcgctactccccggcactgttgaag 209
Query: 388 ctcgtctc 395
||| ||||
Sbjct: 208 ctcctctc 201
>BF01043B1E03
Length = 830
Score = 97.6 bits (49), Expect = 5e-20
Identities = 98/113 (86%), Gaps = 1/113 (0%)
Strand = Plus / Plus
Query: 263 taggtttttttcaaatttggttaagtagaaagaggagcttggacggtgtagattagcgct 322
||||||| ||||||||||||||| ||||| |||||| ||||||| ||| || | ||| ||
Sbjct: 312 taggtttgtttcaaatttggttaggtagagagaggaccttggacagtggaggtgagcact 371
Query: 323 tagcgcgcgttagatagggaccc-ttaaacctacacctgggtcgcaattccca 374
|| |||||||||||||||| ||| ||||||||| |||||||| |||| |||||
Sbjct: 372 taacgcgcgttagataggggccctttaaacctatacctgggttgcaagtccca 424
>BF14_335_C2
Length = 1827
Score = 77.8 bits (39), Expect = 5e-14
Identities = 116/140 (82%), Gaps = 5/140 (3%)
Strand = Plus / Minus
Query: 259 ctagtaggtttttttcaaatttggttaagtagaaagaggagcttggacggtgtagattag 318
|||||||||| ||||||||||||||| | | |||||||||||||||||| || | ||
Sbjct: 1007 ctagtaggttcgtttcaaatttggttagg---agagaggagcttggacggtggaggtgag 951
Query: 319 cgcttag--cgcgcgttagatagggacccttaaacctacacctgggtcgcaattcccagg 376
|| | | |||| ||||||||||| | |||||||||||||||| ||||||| |||||||
Sbjct: 950 cgttatgtacgcgagttagataggggctcttaaacctacacctgtgtcgcaaatcccagg 891
Query: 377 tagtgttaaagctcgtctcc 396
| |||| |||||| |||||
Sbjct: 890 cactgttgaagctcctctcc 871
>BF01049B1F01
Length = 840
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 331 gttagatagggacccttaaacctacacctgggtcgcaattcccaggtagtgttaaagctc 390
||||||||||| |||||| ||||||||||||||||||| ||||||| | |||| ||||||
Sbjct: 660 gttagatagggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctc 601
Query: 391 gtctcc 396
|||||
Sbjct: 600 ctctcc 595
>BF14_335_C4
Length = 1491
Score = 75.8 bits (38), Expect = 2e-13
Identities = 105/126 (83%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 272 ttcaaatttggttaagtagaaagaggagcttggacggtgtagattagcgcttagcgcgcg 331
|||| ||||||||| ||||| ||||||||||||| || || | |||| ||| |||||
Sbjct: 1177 ttcatatttggttaggtagagagaggagcttggaaagttgaggtgagcgtttaatgcgcg 1236
Query: 332 ttagatag-ggacccttaaacctacacctgggtcgcaattcccaggtagtgttaaagctc 390
| ||||| || |||||||||||||||||||||||||| ||||||| | |||| ||||||
Sbjct: 1237 taagataaaggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctc 1296
Query: 391 gtctcc 396
|||||
Sbjct: 1297 ctctcc 1302
>BF01019A1H08
Length = 504
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 343 cccttaaacctacacctgggtcgcaattcccaggtagtgttaaagctcgtctcc 396
|||||||||||||||||||||||||| ||||||| | |||| |||||| |||||
Sbjct: 480 cccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctcc 427
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 147,268
Number of extensions: 2962
Number of successful extensions: 2962
Number of sequences better than 1.0e-10: 8
Number of HSP's gapped: 2959
Number of HSP's successfully gapped: 8
Length of query: 1480
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1463
Effective length of database: 8,119,229
Effective search space: 11878432027
Effective search space used: 11878432027
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)