BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06995 (UTR included)
(1375 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 149 1e-35
BF14_335_C4 119 1e-26
BF01049B1F01 101 3e-21
BF01016B1E06 94 7e-19
BF01043B1E03 92 3e-18
BF14_335_C5 84 7e-16
BF01031B2E06 78 4e-14
BF01019A1H08 74 7e-13
BF01021A2B11 70 1e-11
>BF14_335_C2
Length = 1827
Score = 149 bits (75), Expect = 1e-35
Identities = 260/317 (82%), Gaps = 11/317 (3%)
Strand = Plus / Minus
Query: 819 ctcactaagaataggttcgtcgtaaa-tttgtacgcggtagaagtggggga----gcaat 873
||||||| |||||||||||| |||| |||||||| |||||||||||| || | |
Sbjct: 1164 ctcactaggaataggttcgtaataaaatttgtacgtggtagaagtgggagaaagtgagag 1105
Query: 874 aggtataacagctaaatttctctacaatctactgaatgtcttggggctgtccagggctat 933
||||||||||||||||| |||||||| ||||| || |||||| |||||||| |||
Sbjct: 1104 aggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaactaa 1045
Query: 934 catcagttcatttttagaacgtacttcgaagtcagacctagtaggtccgtttcaaatttg 993
|| ||||||||| || ||||||||||||||| ||| ||||||||| |||||||||||||
Sbjct: 1044 caccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaatttg 985
Query: 994 tttaggtagagagaggagcttggacggttgaggtgagcgt--ttaacgcgcgtcagatat 1051
|||| |||||||||||||||||||| ||||||||||| | ||||| || |||||
Sbjct: 984 gttag---gagagaggagcttggacggtggaggtgagcgttatgtacgcgagttagatag 928
Query: 1052 ggacccttaaaatctacaattgggtcgcaagtcctaggcactgataaagctcctctcccc 1111
|| | ||| ||| ||||| || ||||||| ||| |||||||| | |||||||||||||
Sbjct: 927 gggctctt-aaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccct 869
Query: 1112 gcaacgcgatggacccg 1128
|||||||| |||||||
Sbjct: 868 gcaacgcggcggacccg 852
>BF14_335_C4
Length = 1491
Score = 119 bits (60), Expect = 1e-26
Identities = 121/140 (86%), Gaps = 1/140 (0%)
Strand = Plus / Plus
Query: 984 ttcaaatttgtttaggtagagagaggagcttggacggttgaggtgagcgtttaacgcgcg 1043
|||| ||||| ||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 1177 ttcatatttggttaggtagagagaggagcttggaaagttgaggtgagcgtttaatgcgcg 1236
Query: 1044 tcagatatggacccttaaaatctacaattgggtcgcaagtcctaggcactgataaagctc 1103
| ||||| | ||| | ||| ||||| |||||||||||||| |||||||| | ||||||
Sbjct: 1237 taagataaaggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctc 1296
Query: 1104 ctctccccgcaacgcgatgg 1123
|||| || ||||||||||||
Sbjct: 1297 ctct-cctgcaacgcgatgg 1315
>BF01049B1F01
Length = 840
Score = 101 bits (51), Expect = 3e-21
Identities = 106/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 995 ttaggtagagagaggagcttggacggttgaggtgagcgtttaacgcgcgtcagatatgga 1054
||||||||||||||||||||||||||| |||||| | |||||||| | || ||||| ||
Sbjct: 708 ttaggtagagagaggagcttggacggtagaggtgggtgtttaacgggagttagatagggc 649
Query: 1055 cccttaaaatctacaattgggtcgcaagtcctaggcactgataaagctcctctccccgca 1114
||||| | | ||||| |||||||||||||| |||||||| | ||||||||||||| |||
Sbjct: 648 ccctt-acacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 590
Query: 1115 acg 1117
|||
Sbjct: 589 acg 587
>BF01016B1E06
Length = 606
Score = 93.7 bits (47), Expect = 7e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 983 tttcaaatttgtttaggtagagagaggagcttggacggttgaggtgagcgtttaacgcg 1041
||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 323 tttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgtttaacgcg 265
>BF01043B1E03
Length = 830
Score = 91.7 bits (46), Expect = 3e-18
Identities = 171/212 (80%), Gaps = 3/212 (1%)
Strand = Plus / Plus
Query: 874 aggtataacagctaaatttctctacaatctactgaatgtcttggggctgtccagggctat 933
||||||||||||| || ||||||||| |||||||| |||| | ||| |||| |||
Sbjct: 214 aggtataacagcttcatctctctacaacctactgaaacacttgagcctgcccagaactaa 273
Query: 934 catcagttcatttttagaacgtacttcgaagtcagacctagtaggtccgtttcaaatttg 993
||||| ||||| || ||||||||| | ||| ||| ||||| || ||||||||||||
Sbjct: 274 catcaaatcattcttggaacgtactgcaaaggcaggcctag---gtttgtttcaaatttg 330
Query: 994 tttaggtagagagaggagcttggacggttgaggtgagcgtttaacgcgcgtcagatatgg 1053
|||||||||||||||| ||||||| || ||||||||| ||||||||||| ||||| ||
Sbjct: 331 gttaggtagagagaggaccttggacagtggaggtgagcacttaacgcgcgttagataggg 390
Query: 1054 acccttaaaatctacaattgggtcgcaagtcc 1085
||||| ||| ||| | ||||| ||||||||
Sbjct: 391 gccctttaaacctatacctgggttgcaagtcc 422
>BF14_335_C5
Length = 1597
Score = 83.8 bits (42), Expect = 7e-16
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 997 aggtagagagaggagcttggacggttgaggtgagcgtttaacgcgcgtcagatatggacc 1056
||||||||||||||||||||||||| ||||||||||||||| |||||| ||| | || |
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcg 1497
Query: 1057 cttaaaatctacaattgggtcgcaagtcctaggcactgataaagctcctctcc 1109
| | ||| ||||| |||||||||| |||||||| | ||||||||||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctcc 1550
>BF01031B2E06
Length = 707
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 819 ctcactaagaataggttcgtcgtaaatttgtacgcggtagaagtggg 865
|||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 488 ctcactaagaataggttcgtggcaaatttgtacgcggtagaagtggg 534
>BF01019A1H08
Length = 504
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 1072 tgggtcgcaagtcctaggcactgataaagctcctctccccgcaacgcgatggacccg 1128
|||||||||| ||| |||||||| | ||||||||||||| |||||||||||||||||
Sbjct: 464 tgggtcgcaactcccaggcactgttgaagctcctctccctgcaacgcgatggacccg 408
>BF01021A2B11
Length = 729
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1003 agagaggagcttggacggttgaggtgagcgtttaacgcg 1041
||||||||||||||||||| |||||||||||||||||||
Sbjct: 373 agagaggagcttggacggtggaggtgagcgtttaacgcg 411
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 126,471
Number of extensions: 2509
Number of successful extensions: 2509
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 2506
Number of HSP's successfully gapped: 9
Length of query: 1375
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1358
Effective length of database: 8,119,229
Effective search space: 11025912982
Effective search space used: 11025912982
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)