BLASTN 2.2.24 [Aug-08-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DPGLEAN07019 (UTR included) (1273 letters) Database: est 9484 sequences; 8,280,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BF01055A1H12 194 2e-49 BF01062A1H02 76 2e-13 BF14_2249_C1 70 9e-12
>BF01055A1H12 Length = 743 Score = 194 bits (98), Expect = 2e-49 Identities = 141/154 (91%), Gaps = 1/154 (0%) Strand = Plus / Minus Query: 872 cagtggcgttcacaccatagatgcaaataagcactgccataccctacccatataacaact 931 ||||||||| ||| ||| |||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 620 cagtggcgtgcactccacagatgcaaataagcactgcc-tactctacccatataacaact 562 Query: 932 aaacctatattgtttaattcttacttacatactttgaatcatacattacgaaatacaaat 991 |||||| |||| ||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 561 aaacctgtattatttaattcttactcacatacttttaatcatacattacgaaatacaaat 502 Query: 992 gtttaaagacatttaaaatgacatttgattcacg 1025 ||||| |||| ||||| ||| ||||||||||||| Sbjct: 501 gtttacagacgtttaacatgtcatttgattcacg 468 >BF01062A1H02 Length = 876 Score = 75.8 bits (38), Expect = 2e-13 Identities = 48/50 (96%), Gaps = 1/50 (2%) Strand = Plus / Minus Query: 886 ccatagatgcaaataagcactgccataccctacccatataacaactaaac 935 ||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 846 ccatagatgcaaataagcactgc-ataccctacccgtataacaactaaac 798 >BF14_2249_C1 Length = 1315 Score = 69.9 bits (35), Expect = 9e-12 Identities = 145/178 (81%), Gaps = 4/178 (2%) Strand = Plus / Minus Query: 1083 gccgctgctaactgctagcgccgctatgcagccagagcagcggtagg--caactactcgg 1140 |||||||||||||||||||| ||||||||||| |||| ||| |||| |||| |||||| Sbjct: 1275 gccgctgctaactgctagcgttgctatgcagccggagcggcgctaggcacaaccactcgg 1216 Query: 1141 tgcttgctttcagtacaaatgatctcaaggacgaccttcaaatctcgtgttgtatgagaa 1200 ||||| |||| |||||| ||||||||||| || | ||||||||| |||||| | Sbjct: 1215 tgcttattttccatacaaaaatactcaaggacgatctactaatctcgtg-tgtatgcaga 1157 Query: 1201 aatgtttgcatacgtttgt-gtaaaagctatgcatgtattgtattcgagaggcactgc 1257 ||||||||||| || || | |||| ||||||||| ||||||||| |||||||||| Sbjct: 1156 aatgtttgcatgtgtgagtggaaaaacctatgcatgagttgtattcgtgaggcactgc 1099 Database: est Posted date: Jul 14, 2011 2:25 PM Number of letters in database: 8,280,457 Number of sequences in database: 9484 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 9484 Number of Hits to DB: 189,855 Number of extensions: 4267 Number of successful extensions: 4267 Number of sequences better than 1.0e-10: 3 Number of HSP's gapped: 4262 Number of HSP's successfully gapped: 3 Length of query: 1273 Length of database: 8,280,457 Length adjustment: 17 Effective length of query: 1256 Effective length of database: 8,119,229 Effective search space: 10197751624 Effective search space used: 10197751624 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 50 (99.1 bits) S1: 12 (24.3 bits) S2: 34 (67.9 bits)