BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07061 (UTR included)
(1258 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B2H08 127 5e-29
BF01055B2A04 86 2e-16
BF14_335_C2 74 6e-13
BF01031B2E06 72 2e-12
>BF01038B2H08
Length = 769
Score = 127 bits (64), Expect = 5e-29
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 484 gtatcgtctgcgggctgatggcagccctgtgggtgttcctccaccgccagtacgtgctct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gtatcgtctgcgggctgatggcagccctgtgggtgttcctccaccgccagtacgtgctct 765
Query: 544 tcat 547
||||
Sbjct: 766 tcat 769
>BF01055B2A04
Length = 830
Score = 85.7 bits (43), Expect = 2e-16
Identities = 93/109 (85%), Gaps = 3/109 (2%)
Strand = Plus / Minus
Query: 87 taattgagcttacggttccttaggaaacctacatccccaaagaccatgccatctaggtga 146
|||| ||||||||| |||| | | ||||| ||||||||||||||| ||||| | |||| |
Sbjct: 543 taatagagcttacgattccctggaaaaccaacatccccaaagaccgtgccaccgaggtca 484
Query: 147 ataagtattacgagctcactaacgaactcactcgaaatagattcgtcgt 195
||||||| | |||||||||||||||||||| | ||||||||||||||
Sbjct: 483 ataagta---caagctcactaacgaactcactaggaatagattcgtcgt 438
>BF14_335_C2
Length = 1827
Score = 73.8 bits (37), Expect = 6e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 87 taattgagcttacggttccttaggaaacctacatccccaaagaccatgccatctaggtga 146
|||| |||| ||||||||||| | | ||| ||||||||||| ||||||||||| |||| |
Sbjct: 1238 taatagagcctacggttccttggaagaccaacatccccaaaaaccatgccatcaaggtca 1179
Query: 147 ataagtattacgagctcacta 167
| |||||||| ||||||||||
Sbjct: 1178 acaagtattatgagctcacta 1158
>BF01031B2E06
Length = 707
Score = 71.9 bits (36), Expect = 2e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 110 gaaacctacatccccaaagaccatgccatctaggtgaataagtattacg-agctcactaa 168
|||||| ||||||||||||||||||||||| || | ||||||||||||| ||||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacgaagctcactaa 495
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 192,504
Number of extensions: 11165
Number of successful extensions: 11165
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 11164
Number of HSP's successfully gapped: 4
Length of query: 1258
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1241
Effective length of database: 8,119,229
Effective search space: 10075963189
Effective search space used: 10075963189
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)