BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07065 (UTR included)
(5371 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014A2A01 680 0.0
>BF01014A2A01
Length = 749
Score = 680 bits (343), Expect = 0.0
Identities = 343/343 (100%)
Strand = Plus / Minus
Query: 915 ggccaaatgactgttgggaaaactaatttaagcaaagtagtgaaagatgcaaaactgttg 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ggccaaatgactgttgggaaaactaatttaagcaaagtagtgaaagatgcaaaactgttg 528
Query: 975 ttttataatagaactgtcttacaaaaatttgatctcataaaagtgcaatactctacacaa 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ttttataatagaactgtcttacaaaaatttgatctcataaaagtgcaatactctacacaa 468
Query: 1035 gttgtgggcggcagagctttaaagagtatattactaagattgaataggttctaccaacct 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gttgtgggcggcagagctttaaagagtatattactaagattgaataggttctaccaacct 408
Query: 1095 acattgtgtactcagcctaagattggcaaacttcataatatcattaactatctgttagaa 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 acattgtgtactcagcctaagattggcaaacttcataatatcattaactatctgttagaa 348
Query: 1155 gcaccagattattctgaacagactgacgttatgatcaaaaaaggtttattaactccacca 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gcaccagattattctgaacagactgacgttatgatcaaaaaaggtttattaactccacca 288
Query: 1215 caaagcaagagattacaaaaaactattaacatatttaactttg 1257
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 caaagcaagagattacaaaaaactattaacatatttaactttg 245
Score = 242 bits (122), Expect = 5e-63
Identities = 125/126 (99%)
Strand = Plus / Minus
Query: 1257 gaagaaaaagacataataataaaccgtggtgaaaattctaaaatggaaccttcaagacac 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gaagaaaaagacataataataaaccgtggtgaaaattctaaaatggaaccttcaagacac 67
Query: 1317 actgtgaaaaggaaatgtatatctctcaactgtcagagtgatgagtcccaatcagatgag 1376
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 66 actgtgaaaaggaaatgtatatctctcaactgtcagagcgatgagtcccaatcagatgag 7
Query: 1377 gaaagt 1382
||||||
Sbjct: 6 gaaagt 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 703,501
Number of extensions: 15295
Number of successful extensions: 15295
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15295
Number of HSP's successfully gapped: 2
Length of query: 5371
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5353
Effective length of database: 8,109,745
Effective search space: 43411464985
Effective search space used: 43411464985
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)