BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07071 (UTR included)
(2566 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B1H01 1126 0.0
>BF01058B1H01
Length = 833
Score = 1126 bits (568), Expect = 0.0
Identities = 583/588 (99%)
Strand = Plus / Plus
Query: 1350 atctttaaagtggctgctaccaataaaagaaaactgtcaccagaaactatcaagcaactg 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 atctttaaagtggctgctaccaataaaagaaaactgtcaccagaaactatcaagcaactg 69
Query: 1410 acagatgagtcggctgaacaggaagaggagaaaccatcgctgggagacattaatgatcaa 1469
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 70 acagatgagtcggctgaacaggaagaggagaaaccatcgctgggagacattaatgaccaa 129
Query: 1470 ccgtctctcgcgctgcaagtgctcaagtcgcgagtgatcatgataagattatgcatttgt 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ccgtctctcgcgctgcaagtgctcaagtcgcgagtgatcatgataagattatgcatttgt 189
Query: 1530 tccttttggtggataactgtgacgtttatttattacggcctatctataaactcagtgtca 1589
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tccttttggtggataaccgtgacgtttatttattacggcctatctataaactcagtgtca 249
Query: 1590 ttggcggggaacagctatgttaattatattttaacagctttggtagaaatccctggttat 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttggcggggaacagctatgttaattatattttaacagctttggtagaaatccctggttat 309
Query: 1650 tgcatcagtgtgttgactctagacagattcggtagaaaaagttctattatgacagcgttc 1709
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgcatcagtgtgttaactctagacagattcggtagaaaaagttctattatgacagcgttc 369
Query: 1710 tttatttgtggaatctctttagtatgtctgccgttcataccaggacatgtgcaatgggtc 1769
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 370 tttatttgtggaatctctttagtatgtctgccgttcattccaggacatgtgcaatgggtc 429
Query: 1770 caaacgtgtctcaacttgttgggcaaattgtgcattagcatggcttttagcagtatatat 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 caaacgtgtctcaacttgttgggcaaattgtgcattagcatggcttttagcagtatatat 489
Query: 1830 atatacacttcggaactgtatccaacgatgatcagacagagtttgctgtctctgtgttca 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 atatacacttcggaactgtatccaacgatgatcagacagagtttgctgtctctgtgttca 549
Query: 1890 gtctgtggaagaatcggacagattgtggccccccaaacgccactcttg 1937
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 550 gtctgtggaagaataggacagattgtggccccccaaacgccactcttg 597
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 344,276
Number of extensions: 11742
Number of successful extensions: 11742
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11742
Number of HSP's successfully gapped: 1
Length of query: 2566
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2549
Effective length of database: 8,119,229
Effective search space: 20695914721
Effective search space used: 20695914721
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)