BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07098 (UTR included)
(1804 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A1C03 1146 0.0
BF14_2473_C1 462 e-130
>BF01041A1C03
Length = 834
Score = 1146 bits (578), Expect = 0.0
Identities = 593/598 (99%)
Strand = Plus / Plus
Query: 539 aaataatctgtacgaggttttacaaatatcagaaaagtcttcggataaagaagttaagaa 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaataatctgtacgaggttttacaaatatcagaaaagtcttcggataaagaagttaagaa 60
Query: 599 agcctaccacaaattatcacttaaagttcatcctgatcgagtaaaggatgaggaaaagtt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcctaccacaaattatcacttaaagttcatcctgatcgagtaaaggatgaggaaaagtt 120
Query: 659 agaggctacagaaaaatttaaagtccttagtaatgttcatgccatattaagtaataaaga 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaggctacagaaaaatttaaagtccttagtaatgttcatgccatattaagtaataaaga 180
Query: 719 aaaaagagatctatatgatcaaactaaaagtgttgatgaagaagattatgatgatcttaa 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaaagagatctatatgatcaaactaaaagtgttgatgaagaagattatgatgatcttaa 240
Query: 779 tgctaaggattggactgtgtactggagaaacatgttcaaaaagattacagaagaagatat 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgctaaggattggactgtgtactggagaaacatgttcaaaaagattacagaagaagatat 300
Query: 839 taaagcttatgaaaaagaatacatcggttcagaagaggaaaggaaggatttaaaaactgc 898
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 301 taaagcttatgaaaaagaatacattggttcagaagaggaaaggaaggatttaaaaactgc 360
Query: 899 atatttagctgggaagggtgatatggattatattgtggatcaagtacagtttgctcgttc 958
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 361 atatttagctgggaagggtgatatgcattatattgtggatcaagtacagtttgctcgttc 420
Query: 959 agaacatgaacccagaatatgtggcattctaatggaaatgattgaacaaggtgagattcc 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agaacatgaacccagaatatgtggcattctaatggaaatgattgaacaaggtgagattcc 480
Query: 1019 ctcttacaagatatttacccatgaaccggctagaaagaagcaaaaacgtcatgccaaaga 1078
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 481 ctcttacaagatatttacccatgaaccggctagaaagaagcaaaaacgtcacgccaaaga 540
Query: 1079 aaacagggaagctcaagaagctgaagaactaaaagaatcattggggctaactgcaggt 1136
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 541 aaacagggaagcccaagaagctgaagaactaaaagaatcattggggctaaatgcaggt 598
>BF14_2473_C1
Length = 1670
Score = 462 bits (233), Expect = e-130
Identities = 245/249 (98%)
Strand = Plus / Minus
Query: 1321 atggttattttattgaaatttaatacatttttaaatagttaagcattatattttattcgc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1669 atggttattttattgaaatttaatacatttttaaatagttaagcattatattttattcgc 1610
Query: 1381 catccatagcaacttctaaagtagtttcagactggaacggtccaagttccacatattttt 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1609 catccatagcaacttctaaagtagtttcagactggaacggtccaagttccacatattttt 1550
Query: 1441 ggagccgaatgataatggcttcatcaaaagctgtagatgaagctaacctctttattatat 1500
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1549 ggagccgaatgataatggcttcatcgaaagctgtagatgaagctaacctctttattatat 1490
Query: 1501 catatttagcttcattgcattccttgttgaaatccgttgtccgatccaataaatactcga 1560
||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 1489 catatttagcttcattgcattccttattaaaatctgttgtccgatccaataaatactcga 1430
Query: 1561 taaaacctg 1569
|||||||||
Sbjct: 1429 taaaacctg 1421
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,437
Number of extensions: 4938
Number of successful extensions: 4938
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4938
Number of HSP's successfully gapped: 2
Length of query: 1804
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1787
Effective length of database: 8,119,229
Effective search space: 14509062223
Effective search space used: 14509062223
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)