BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07116 (UTR included)
(2836 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060B2C10 1497 0.0
BF01037B1A12 448 e-125
BF14_1522_C1 165 5e-40
>BF01060B2C10
Length = 771
Score = 1497 bits (755), Expect = 0.0
Identities = 767/771 (99%)
Strand = Plus / Plus
Query: 1410 gcctggacggcttggtacgccgtcggctgctactattacctaataggtaagagcgagttc 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 gcctggacggcttggtacgccgtcggctgctactattacctaataggtaagagtgagttc 60
Query: 1470 gcccgtcgctacctgagcaaggcgtgctcgctggaggcgggcgcgggctgcgtgtggctc 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcccgtcgctacctgagcaaggcgtgctcgctggaggcgggcgcgggctgcgtgtggctc 120
Query: 1530 gcctacggacacagcttcgccgccgacaacgagcacgaccaggccatggccgcttacttc 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcctacggacacagcttcgccgccgacaacgagcacgaccaggccatggccgcttacttc 180
Query: 1590 aaggccagccagttaatgcccggctgctacctgccctcgctgtacgtgggcgtggagtgc 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaggccagccagttaatgcccggctgctacctgccctcgctgtacgtgggcgtggagtgc 240
Query: 1650 tccttgttaaacaacgtcagcatgtgcgagaggttcatgtcgagagctgcttcattgcac 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccttgttaaacaacgtcagcatgtgcgagaggttcatgtcgagagctgcttcattgcac 300
Query: 1710 agcaatgctgagacggacagtgtgggcatagagacggacatagagcagcggggtgggtgg 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcaatgctgagacggacagtgtgggcatagagacggacatagagcagcggggtgggtgg 360
Query: 1770 gagagagtgtgtcgtgtggtgaggtccccgcacgtagcgcacgaggccgccgccgccgct 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagagagtgtgtcgtgtggtgaggtccccgcacgtagcgcacgaggccgccgccgccgct 420
Query: 1830 ctggccgcgggacatccggaacacgcgagggtgctcttcactagggccctccactacgcc 1889
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 421 ctggccgcgggacatccggaacacgcgagggtgctcttcactagagccctccactacgcc 480
Query: 1890 gggccccccgaccagttaaacccgtgctgggcgaccactctggacgcgctgggtcacgtg 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggccccccgaccagttaaacccgtgctgggcgaccactctggacgcgctgggtcacgtg 540
Query: 1950 aaccgtgtgctgggtaatccgtcggaggctttgcaatggcacgagcgagcgctagcgctt 2009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaccgtgtgctgggtaatccgtcggaggctttgcaatggcacgagcgagcgctagcgctt 600
Query: 2010 cgccccgcgcgggcgtccaccctcgccgccaaggggctctgcctcgcgctactgggccgg 2069
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 601 cgccccgcgcgggcgtccaccctcgccgccaaggggctctgtctcgcgctactgggccgg 660
Query: 2070 gagcccgaggccgcagacacgctccacgcggcgctggccagagaccccgaccacgtggtc 2129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagcccgaggccgcagacacgctccacgcggcgctggccagagaccccgaccacgtggtc 720
Query: 2130 gccatagcgctcctcgacgccatcattgataggctggacgcacagctcaca 2180
|||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 721 gccatagcgctcctcgacgccatcattgataggctggacgcacaactcaca 771
>BF01037B1A12
Length = 278
Score = 448 bits (226), Expect = e-125
Identities = 265/278 (95%)
Strand = Plus / Minus
Query: 2280 cccgccggcaggaccgacgccaccaacacctccgacatgagcatgagcttcgattagacg 2339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 cccgccggcaggaccgacgccaccaacacctccgacatgagcatgagcttcgattagacg 219
Query: 2340 aagacacgtcagtatccttgcaactaacaaatggctgccatcacaaaccgaacacggccg 2399
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||
Sbjct: 218 aagacacgtcagtatccttacaactaacaaatgggtgccatcacaaaccgaacacggtcg 159
Query: 2400 gtgtcacgttcctacgttaaattaatatgagcaggtttataagatacagtctattataac 2459
| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 158 gggtcacgttcctacgttaaattaatatgagcaggtttataagataccgtttattataac 99
Query: 2460 gcgaaacgacgatgctaagttgtgttaaagaaatagacacagactaaaagaattaaatgt 2519
| |||||||||||||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct: 98 gggaaacgacgatgctaagttgtgttaaagaaatagaccccggctaaaagaattaaatgt 39
Query: 2520 caaacattgttttgttaacaaatgtgtttataatcttt 2557
||||| |||||||||||||||| | |||||||||||||
Sbjct: 38 caaaccttgttttgttaacaaaagggtttataatcttt 1
>BF14_1522_C1
Length = 1093
Score = 165 bits (83), Expect = 5e-40
Identities = 86/87 (98%)
Strand = Plus / Minus
Query: 1 acgaacaccttaattatattcgatttatatttacaaaaatttaatcataatcagcctatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 acgaacaccttaattatattcgatttatatttacaaaaatttaatcataatcagcctatt 30
Query: 61 ccctctttttctgtgtataaccttttt 87
||||||||||||||||||||| |||||
Sbjct: 29 ccctctttttctgtgtataacgttttt 3
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,910
Number of extensions: 6083
Number of successful extensions: 6083
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 6083
Number of HSP's successfully gapped: 3
Length of query: 2836
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2819
Effective length of database: 8,119,229
Effective search space: 22888106551
Effective search space used: 22888106551
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)