BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07139 (UTR included)
(2209 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031B2A11 1213 0.0
BF01049B1G02 735 0.0
>BF01031B2A11
Length = 655
Score = 1213 bits (612), Expect = 0.0
Identities = 636/644 (98%)
Strand = Plus / Plus
Query: 1318 tattgattgtcagcaacatggtcatctttatgtacatatcgctcagtctctggcggcaca 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tattgattgtcagcaacatggtcatctttatgtacatatcgctcagtctctggcggcaca 71
Query: 1378 ccttcgcatccacacacataaaggcgctcaaatacaaattctggatgacagtaagaatgt 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ccttcgcatccacacacataaaggcgctcaaatacaaattctggatgacagtaagaatgt 131
Query: 1438 tcatagttatgggactggcgtggatatttgagatgatcagctctttgagcaaacctcata 1497
||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 132 tcatagtcatgggactggcgtggatatttgagatgatcagctctttaagcaaaccccata 191
Query: 1498 tcatatgggtcatactggacttcttcaacttattacaaggattattattatttctggtcc 1557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tcatatgggtcatactggacttcttcaacttattacaaggattattattatttctggtcc 251
Query: 1558 tcgttgtattccggaagcgtgttattaaggagctgtataataaaggctggttggaatgcg 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcgttgtattccggaagcgtgttattaaggagctgtataataaaggctggttggaatgcg 311
Query: 1618 tggctggctgtgtagaacgccatctagcggtgggggatgacgaggaagatgtcgtcgaac 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tggctggctgtgtagaacgccatctagcggtgggggatgacgaggaagatgtcgtcgaac 371
Query: 1678 acacgataggtgtagcccttgaggagaaatgaaacagctgcactgctgttcaaagtatac 1737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 acacgataggtgtagcccttgaggagaaatgaaacagctgcactgctgttcaaagtatac 431
Query: 1738 tagtccttattttatacgcgttagaatcaatattcgtatacacaactgaatgatttatct 1797
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 432 tagtccttattttatacgcattagaatcaatattcgtatacacaactgaatgacttatct 491
Query: 1798 cgatgacttatgatacagtaactaacagtattgtcgtgacttgtttcttgtatgtattat 1857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cgatgacttatgatacagtaactaacagtattgtcgtgacttgtttcttgtatgtattat 551
Query: 1858 atcgttaatgttaatgagttatagtgaaattgttacaggcaatttctcatctagaaatgt 1917
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 552 atcgttaatgttaatgagttatagtgaaattgttacaggcaatttcccatctagaaatgt 611
Query: 1918 atgaaaaaatattattttaatgctaatgtttttaatgtgaacag 1961
|||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 612 atgaaaaaatgttattttaatgctaatgttttttatgtgaacag 655
>BF01049B1G02
Length = 786
Score = 735 bits (371), Expect = 0.0
Identities = 377/379 (99%)
Strand = Plus / Plus
Query: 375 aaaaggacgtatcaatcggttcgtctcaggacgataaaaaatacgacaacgaatttagcg 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaggacgtatcaatcggttcgtctcaggacgataaaaaatacgacaacgaatttagcg 60
Query: 435 tttcgtttgcaaaaatggtcaccaacatttgacataatagtaaaatcgtgattctcgtgt 494
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttcgtttgtaaaaatggtcaccaacatttgacataatagtaaaatcgtgattctcgtgt 120
Query: 495 gtgaaaatgaagttgatttttctgttcttgacaatcggcctggccggctgtgaggccagc 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgaaaatgaagttgatttttctgttcttgacaatcggcctggccggctgtgaggccagc 180
Query: 555 gattgctgcaaacatggcgttgtagaagacgatgggaatgtctgcgtggatttgctaact 614
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 181 gattgctgcaaacatggcgttgtagaagacgatgggaatgtctgcgtggatttgttaact 240
Query: 615 aacaaaacttcatcaacaagtctcacgtgttctcatgttgatcacttgtcgttacaaatg 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacaaaacttcatcaacaagtctcacgtgttctcatgttgatcacttgtcgttacaaatg 300
Query: 675 ttcaacttcacagtcagtgaggattctctgatattgaatttaaacgaggatatggttatt 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcaacttcacagtcagtgaggattctctgatattgaatttaaacgaggatatggttatt 360
Query: 735 gaactagaaagtgataagt 753
|||||||||||||||||||
Sbjct: 361 gaactagaaagtgataagt 379
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 267,414
Number of extensions: 5566
Number of successful extensions: 5566
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5566
Number of HSP's successfully gapped: 2
Length of query: 2209
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2192
Effective length of database: 8,119,229
Effective search space: 17797349968
Effective search space used: 17797349968
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)