BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07180 (UTR included)
(2580 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B2B07 1084 0.0
BF01059B2E01 74 1e-12
>BF01023B2B07
Length = 768
Score = 1084 bits (547), Expect = 0.0
Identities = 556/559 (99%)
Strand = Plus / Plus
Query: 544 aggatgtattatcaaaagcatttactacaaataatatcgatttgctcgattccttttcaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aggatgtattatcaaaagcatttactacaaataatatcgatttgctcgattccttttcaa 269
Query: 604 aaaatgcgaatgagagcgacagaaaatcagccatggaccaagcctttagagataaactac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aaaatgcgaatgagagcgacagaaaatcagccatggaccaagcctttagagataaactac 329
Query: 664 tggatttgctattagaggagccaaataccttggaaagctatgtaaatttttgtatagact 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tggatttgctattagaggagccaaataccttggaaagctatgtaaatttttgtatagact 389
Query: 724 catgtcgaaggcaaatggtgactgcaactatgcctgtagttcttttgggtgatattttcg 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 catgtcgaaggcaaatggtgactgcaactatgcctgtagttcttttgggtgatattttcg 449
Query: 784 atgcactaacactgaacaagtgtgaaaaaatgtttatgtatgttgaaaatggagtaaata 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 atgcactaacactgaacaagtgtgaaaaaatgtttatgtatgttgaaaatggagtaaata 509
Query: 844 tatggagggaagaattattctttgtggcatgtaagaaccatttactaagaatgtgtaatg 903
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tttggagggaagaattattctttgtggcatgtaagaaccatttactaagaatgtgtaatg 569
Query: 904 acttactgagaagattatcaagatctcaaaatacggtattctgtggcagaatattgttat 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 acttactgagaagattatcaagatctcaaaatacggtattctgtggcagaatattgttat 629
Query: 964 tcttagccaaattctttccattttctgagcgctctgggcttaatattgtgtccgaattca 1023
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tcttagccaaattctttccgttttctgagcgctctgggcttaatattgtgtccgaattca 689
Query: 1024 acttggaaaatattacggagtttggtggtgataatacaagtaccttaaaggatgtattgg 1083
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 acttggaaaacattacggagtttggtggtgataatacaagtaccttaaaggatgtattgg 749
Query: 1084 atgaagaaatggttgttga 1102
|||||||||||||||||||
Sbjct: 750 atgaagaaatggttgttga 768
Score = 248 bits (125), Expect = 4e-65
Identities = 140/145 (96%)
Strand = Plus / Plus
Query: 402 cgtaaataagatatttgacatgatccttaaaatatctaggactaatatattagaggaata 461
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 1 cgtaaataagatatttgacatgatctttaaaatatctagaactaatatattagaggaata 60
Query: 462 aatattatagtatcaattttttatttctagcgtttcaaaatgtccgaaaaagttggattt 521
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatattatcgtatcaattttttatttctagcgtttcaaaatgtccgaaaaagttggattt 120
Query: 522 gatgagttgcggcttaagtataagg 546
|||||||||| ||| ||||||||||
Sbjct: 121 gatgagttgctgctaaagtataagg 145
>BF01059B2E01
Length = 596
Score = 73.8 bits (37), Expect = 1e-12
Identities = 94/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 2349 ctagatgatttacattcataaatcagtccggtagatggcgctgcagtcggtagctaggtt 2408
||||||| |||| ||| | | ||||| |||| |||||||||||||||||||| ||| |||
Sbjct: 399 ctagatggtttagattaacatatcagcccggcagatggcgctgcagtcggtatctaagtt 340
Query: 2409 atttaaagtggaaaggctgcaacatgggttactcactatgtattgttttaac 2460
||||||| || ||| | |||||| | ||||||| | |||||||||||||||
Sbjct: 339 atttaaaatgaaaacgttgcaacgtaggttactaa--atgtattgttttaac 290
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 349,684
Number of extensions: 7446
Number of successful extensions: 7446
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7445
Number of HSP's successfully gapped: 3
Length of query: 2580
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2563
Effective length of database: 8,119,229
Effective search space: 20809583927
Effective search space used: 20809583927
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)