BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07184 (UTR included)
(2626 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1603_C1 1013 0.0
>BF14_1603_C1
Length = 880
Score = 1013 bits (511), Expect = 0.0
Identities = 517/519 (99%)
Strand = Plus / Plus
Query: 1627 gcgcggcaggcctgccagacgcaccacaccccagggacctcaagttccttctgccgaagc 1686
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 gcgcggcaggcctgccagacgcaccacaccccatggacctcaagttccttctgccgaagc 60
Query: 1687 ctctcctagctctgaaagagccgcgtcccaacaagtgggcgtcgtgggtcggcaacgagt 1746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctctcctagctctgaaagagccgcgtcccaacaagtgggcgtcgtgggtcggcaacgagt 120
Query: 1747 ggccgactgtgcggactctgtcgcctgccgcagctaaatccaaagttttacaagtattat 1806
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggccgactgtgaggactctgtcgcctgccgcagctaaatccaaagttttacaagtattat 180
Query: 1807 ctcgctggtccctgttcgggtcgtctttcttcgcggtgcggcgcgtgcagggcggcgaat 1866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcgctggtccctgttcgggtcgtctttcttcgcggtgcggcgcgtgcagggcggcgaat 240
Query: 1867 ggcgcgagcacgtgctggctctcaacaggcgaggcctgcacctgctgcaccccgccacgc 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcgcgagcacgtgctggctctcaacaggcgaggcctgcacctgctgcaccccgccacgc 300
Query: 1927 acgacacggacgctcactggccctacgccgacctcatctccactaggaaggtccgttccg 1986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acgacacggacgctcactggccctacgccgacctcatctccactaggaaggtccgttccg 360
Query: 1987 aagacgggactctgttcctggacgtgaagtgcggttcccttctgcagcagcgagtgacgc 2046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagacgggactctgttcctggacgtgaagtgcggttcccttctgcagcagcgagtgacgc 420
Query: 2047 ggctccaggcggaacaagctcacgagatagcgagactcatcaggcagtacatcgccctgc 2106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggctccaggcggaacaagctcacgagatagcgagactcatcaggcagtacatcgccctgc 480
Query: 2107 agagagataacagggagggagattcgaggcactcaccag 2145
|||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agagagataacagggagggagattcgaggcactcaccag 519
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 227,490
Number of extensions: 4892
Number of successful extensions: 4892
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4892
Number of HSP's successfully gapped: 1
Length of query: 2626
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2609
Effective length of database: 8,119,229
Effective search space: 21183068461
Effective search space used: 21183068461
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)