BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07187 (UTR included)
(1630 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052A2G05 936 0.0
>BF01052A2G05
Length = 818
Score = 936 bits (472), Expect = 0.0
Identities = 545/566 (96%), Gaps = 5/566 (0%)
Strand = Plus / Plus
Query: 1065 ggacgtaggaggcaatcattacaaagattacaagcgaaacaagacaggaagctgtgtttg 1124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 ggacgtaggaggcaatcattacaaagattacaagcgaaacaagacaggaagttgtgtttg 60
Query: 1125 tgttaattttacagtaacattcaattaagtacaagatctgatttgagactgattttcatt 1184
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttaattttacggtaacattcaattaagtacaagatctgatttgagactgattttcatt 120
Query: 1185 aagtcatattcatcattcaatgtcaagtaggatgtgccaatattcagattttctcaaagc 1244
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagtcat--tcatcgttcaatgtcaagtaggatgtgccaatattcagattttctcaaagc 178
Query: 1245 acgaaccaaagaattgttgcaagtaatatgaaatattacgaattgttttttttttttttg 1304
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 179 atgaaccagagaattgttgcaagtaatatgaaatattacgaattgtttttttttttt--g 236
Query: 1305 catatttatcgagactgttatgaaggaggtagtgatgacagaatatgaaggaaattttta 1364
||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| |
Sbjct: 237 catattt-tcgagactgttatgaaggaggtagtgatgtcagaatatgaaggatattttaa 295
Query: 1365 aaattatgcccaaaaatttgatttaaaatgtaattttggaggtaactttggcttgaatct 1424
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 296 aaattatgcccaaaaatttgatttgaaatgtaattttgggggtaactttggcttgaatct 355
Query: 1425 taaatgcatagaagtttcctaattcgttgttatttatatatgtagagttttatatatttc 1484
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 taaatgcatagatgtttcctaattcgttgttatttatatatgtagagttttatatatttc 415
Query: 1485 ttgtgcaatgttttgtaaacatacaaatttgttatgtgatatcaacaaaatatatccact 1544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ttgtgcaatgttttgtaaacatacaaatttgttatgtgatatcaacaaaatatatccact 475
Query: 1545 attggacttttcagtatggaaatcttcatccagtagtgttaggttattggcaaagttcaa 1604
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 476 attggacttttcagtatggaaatctaagtcccatagtgttaggttattggcaaagttcaa 535
Query: 1605 caattttcatagagtaattgttaatt 1630
||||||||||||||||||||||||||
Sbjct: 536 caattttcatagagtaattgttaatt 561
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,793
Number of extensions: 40150
Number of successful extensions: 40150
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 40145
Number of HSP's successfully gapped: 1
Length of query: 1630
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1613
Effective length of database: 8,119,229
Effective search space: 13096316377
Effective search space used: 13096316377
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)