BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN07190 (UTR included)
(2197 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1B08 98 7e-20
BF01012A1E04 98 7e-20
BF14_729_C2 92 4e-18
BF01025B2E05 90 2e-17
BF01012A1B09 90 2e-17
BF01052B1F12 82 4e-15
BF01025A1D01 82 4e-15
BF01058B2C06 74 1e-12
BF01011A1H06 72 4e-12
BF14_2249_C1 70 2e-11
>BF01056A1B08
Length = 761
Score = 97.6 bits (49), Expect = 7e-20
Identities = 49/49 (100%)
Strand = Plus / Minus
Query: 1933 atattagtttcatttaaatgaataaaactcgcgaaagtcttagatctca 1981
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atattagtttcatttaaatgaataaaactcgcgaaagtcttagatctca 97
>BF01012A1E04
Length = 841
Score = 97.6 bits (49), Expect = 7e-20
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 1933 atattagtttcatttaaatgaataaaactcgcgaaagtcttagatctca 1981
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 atattagtttcatttaaatgaataaaactcgcgaaagtcttagatctca 618
>BF14_729_C2
Length = 1289
Score = 91.7 bits (46), Expect = 4e-18
Identities = 92/106 (86%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 1743 tttaaatgaaactaatattttttggatataccacgcgtacttaatttttttgttaaaact 1802
|||||||||||||| ||| || ||||| || |||||| ||| |||||| | | ||||||
Sbjct: 642 tttaaatgaaactagaattattcggataaactacgcgtgctttatttttgt-taaaaact 584
Query: 1803 acatactctcgacgtttcggttaattttcagcaatcgtgatcacgg 1848
|||||||| |||||||||||||| |||||||||| |||||||||||
Sbjct: 583 acatactcccgacgtttcggttacttttcagcaaccgtgatcacgg 538
Score = 73.8 bits (37), Expect = 1e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 1937 tagtttcatttaaatgaataaaactcgcgaaagtcttagatctca 1981
||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 629 tagtttcatttaaatgattaaaactggcgaaagtcttagatctca 673
>BF01025B2E05
Length = 759
Score = 89.7 bits (45), Expect = 2e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 1937 tagtttcatttaaatgaataaaactcgcgaaagtcttagatctca 1981
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tagtttcatttaaatgaataaaactcgcgaaagtcttagatctca 118
>BF01012A1B09
Length = 841
Score = 89.7 bits (45), Expect = 2e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 1933 atattagtttcatttaaatgaataaaactcgcgaaagtcttagatctca 1981
|||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 754 atattagtttcatttaaatgaataaaactcgcgacagtcttagatctca 706
Score = 79.8 bits (40), Expect = 2e-14
Identities = 90/106 (84%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 1743 tttaaatgaaactaatattttttggatataccacgcgtacttaatttttttgttaaaact 1802
|||||||||||||||||| ||| ||||| || ||||| | || ||| |||| ||||||
Sbjct: 737 tttaaatgaaactaatatatttcggatacactacgcggattttattatttt---aaaact 793
Query: 1803 acatactctcgacgtttcggttaattttcagcaatcgtgatcacgg 1848
||||| || |||||||||||||| ||||||||| |||||||||||
Sbjct: 794 acataatcccgacgtttcggttacttttcagcagccgtgatcacgg 839
>BF01052B1F12
Length = 785
Score = 81.8 bits (41), Expect = 4e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 1933 atattagtttcatttaaatgaataaaactcgcgaaagtcttagat 1977
|||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 346 atattagtttcatttaaatgaataaaactcgcgaaattcttagat 302
>BF01025A1D01
Length = 764
Score = 81.8 bits (41), Expect = 4e-15
Identities = 91/106 (85%), Gaps = 5/106 (4%)
Strand = Plus / Plus
Query: 1743 tttaaatgaaactaatattttttggatataccacgcgtacttaatttttttgttaaaact 1802
|||||||||||||||||||||| |||||||| |||| ||| | |||| ||||||| |
Sbjct: 374 tttaaatgaaactaatatttttcggatatac---gcgtgctttaatttt--gttaaaatt 428
Query: 1803 acatactctcgacgtttcggttaattttcagcaatcgtgatcacgg 1848
||| ||| |||||||||||||| |||||||||| |||||||||||
Sbjct: 429 acaggctcccgacgtttcggttacttttcagcaaccgtgatcacgg 474
>BF01058B2C06
Length = 772
Score = 73.8 bits (37), Expect = 1e-12
Identities = 91/105 (86%), Gaps = 3/105 (2%)
Strand = Plus / Plus
Query: 1745 taaatgaaactaatattttttggatataccacgcgtacttaatttttttgttaaaactac 1804
||||||||||||||||||| | ||| ||| |||||| ||| | |||||||||||||||||
Sbjct: 372 taaatgaaactaatattttct-gat-tactacgcgtgcttta-ttttttgttaaaactac 428
Query: 1805 atactctcgacgtttcggttaattttcagcaatcgtgatcacggc 1849
||| || |||||||||||||| ||| | ||| ||||||||||||
Sbjct: 429 atattcccgacgtttcggttactttgctgcagccgtgatcacggc 473
>BF01011A1H06
Length = 739
Score = 71.9 bits (36), Expect = 4e-12
Identities = 91/107 (85%), Gaps = 3/107 (2%)
Strand = Plus / Minus
Query: 1743 tttaaatgaaactaatattttttggatataccacgcgtacttaatttttttgttaaa-ac 1801
|||||||||| ||| ||||||| ||||| || |||||| || |||||| || ||| ||
Sbjct: 574 tttaaatgaatctagtatttttcggataaactacgcgtgatttattttt--gtaaaagac 517
Query: 1802 tacatactctcgacgtttcggttaattttcagcaatcgtgatcacgg 1848
||||||||| |||||||||||||| ||||||| || |||||||||||
Sbjct: 516 tacatactcccgacgtttcggttacttttcagtaaccgtgatcacgg 470
>BF14_2249_C1
Length = 1315
Score = 69.9 bits (35), Expect = 2e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 1910 aaataacgcgtagcaatgcgaagatattagtttcatttaaatgaata 1956
|||| |||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 387 aaattacgcgtagcaatccgaaaatattagtttcatttaaatgaata 341
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 339,682
Number of extensions: 7670
Number of successful extensions: 7670
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 7667
Number of HSP's successfully gapped: 12
Length of query: 2197
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2180
Effective length of database: 8,119,229
Effective search space: 17699919220
Effective search space used: 17699919220
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)